Alteromonas macleodii English Channel 673: AMEC673_00740
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Entry
AMEC673_00740 CDS
T02254
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amg
Alteromonas macleodii English Channel 673
Pathway
amg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMEC673_00740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amg03019
]
AMEC673_00740
03400 DNA repair and recombination proteins [BR:
amg03400
]
AMEC673_00740
Enzymes [BR:
amg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMEC673_00740
Messenger RNA biogenesis [BR:
amg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMEC673_00740
DNA repair and recombination proteins [BR:
amg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMEC673_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
CRS1_YhbY
T4SS-DNA_transf
PB4_spike
Motif
Other DBs
NCBI-ProteinID:
AFT72854
UniProt:
A0AB32ZTM3
LinkDB
All DBs
Position
complement(168208..170049)
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AA seq
613 aa
AA seq
DB search
MTTAIAPSELAPETQRVKTPETVLKDVFGYDAFRDGQGEVIHQVCEGKDALVLLPTGGGK
SLCYQIPALVRQGTAIVVSPLISLMQDQVEQLKALGVKAAYLNSTLEADEQARINDALQA
GKLDLLYVSPERLMQYYFQQSLAHADIALFAIDEAHCVSHWGHDFRQDYRALGQIKSRFP
SIPVIGLTATADSATQADILTQLNLNDPLVYKGSFDRPNIRYRVMSKYKAFDQVVAYVKQ
QEGSGIIYCNSRAKVDDLHAKLFRQGFRCAAYHAGMDNDERELVQRQFLNDKIDIVVATV
AFGMGINKSNVRYVVHHDVPRSVESYYQETGRAGRDGLESEALLLFDEKDAARVKQWIEQ
GEIAERNQIELQKFAAMEAFSEAQTCRRQVLLNYFSQFSDSACGNCDICLDPPKMIDGLV
IAQKVLSCVLRLSQQASSQYVIDVLRGKQLRRLQEAGHHQLSTYGIGKDKSDSYWHNIIN
QLVHKGLIRVDITAHAALRLTEAARPVLKGEVAVQLAVPRLEFKPDKKKAKQAPANYDRT
LFTRLKHLRKVLAEENEVPPYVVFSDATLVDMACKLPTTRNTLLDVSGVGQTKLERYGEA
FIQLIDDYINREH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgcaatagctccatcagaattagcgccagaaacgcaacgtgtaaaaacacca
gaaaccgtcttaaaagatgtatttggttacgatgcttttcgcgacggtcaaggcgaagtc
attcaccaagtatgtgaaggtaaagacgcacttgttttgcttccaacgggtggcggcaag
tcgctgtgctatcaaattcctgcgttagtgcgccaaggcaccgctattgttgtgtcacca
cttatatcgcttatgcaggaccaagtagaacagcttaaagcgctgggcgtaaaagctgcc
tatctcaattcaacgctagaagcagacgaacaagcacgcataaatgacgcactgcaagct
ggcaaactcgacttgctctacgtgtcgcctgagcgtttaatgcagtactattttcagcag
tcgcttgcgcacgccgacattgccttatttgccattgatgaagcgcactgcgtttcccat
tgggggcacgatttcaggcaggattatcgcgctctggggcaaataaaatctcgcttcccc
tctattcctgttattggactcacagcgactgcagattcagcgacccaagcagacatactg
acgcagctaaaccttaacgacccgctggtttataaaggcagcttcgacagacctaatatc
cgctaccgcgtaatgagcaagtacaaagcctttgatcaagttgttgcttacgtaaaacag
caagaaggtagcggcattatttactgtaacagtcgcgctaaagtcgacgacctgcacgct
aaattattcagacaaggttttcgctgcgcggcctatcacgcgggtatggacaacgacgag
cgagagctggtacaacgccagttccttaacgataaaattgatattgtggtggccaccgtt
gcctttggcatgggtatcaacaaatcgaacgtgcgttatgtggttcaccacgatgttccg
cgcagtgttgaaagctattatcaggagaccggccgagcggggcgagacggcttggagtca
gaagctttattgttgtttgatgaaaaagacgcagcccgcgtaaaacagtggatagagcaa
ggggaaatagccgagcgcaaccaaatagagttacaaaaattcgcagcgatggaagctttt
tcagaagcacaaacctgtcgtagacaagtactcctgaactacttttcgcagttcagtgac
agcgcctgtggcaactgcgacatttgcctagacccacctaagatgatcgacggtttggtg
attgcacaaaaagtactgtcgtgtgtacttcggctctcacagcaagcctctagccagtat
gtcattgatgtcttgcgaggcaagcagcttaggcgccttcaggaagcaggtcaccaccag
ctttccacgtacggcataggtaaagataaatcggatagctactggcacaacattatcaac
cagcttgttcataaaggccttatacgcgttgatattaccgcccatgccgcattgcgctta
accgaggccgctcggcctgtgctaaaaggtgaagtagcggttcagcttgccgttccgcga
cttgaatttaagcccgacaagaaaaaagcaaaacaagcgcctgctaactacgaccgaacg
ttgttcacccgtcttaagcacttacgcaaagtgttggccgaagaaaatgaagtgccgccg
tatgtggtatttagtgacgccaccttagtggatatggcgtgtaaactccccactacgcgc
aacaccttgcttgatgtaagcggcgtaggccaaaccaaactcgaacgctatggtgaggct
tttatccagcttattgatgattacataaatcgagagcactga
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