Alteromonas macleodii English Channel 673: AMEC673_00765
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Entry
AMEC673_00765 CDS
T02254
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amg
Alteromonas macleodii English Channel 673
Pathway
amg03420
Nucleotide excision repair
amg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMEC673_00765
03430 Mismatch repair
AMEC673_00765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amg03400
]
AMEC673_00765
Enzymes [BR:
amg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMEC673_00765
DNA repair and recombination proteins [BR:
amg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMEC673_00765
MMR (mismatch excision repair)
Other MMR factors
AMEC673_00765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AFT72859
LinkDB
All DBs
Position
complement(174730..176901)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENIAPFSILAV
TFTNKAAKEMRGRIESLMGRSLHNMWIGTFHGLAHRLLRAHHAEANLPENFQIIDSDDQY
RLIRRILKAMNLDEKHWAPRQIQWYINGNKDEGLRPQHIETHGDHIQKTMREVYAAYQDA
CDRSGLVDFAELLLRAHELWAKNPEVLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGG
NNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFNEPNTIRLEQNYRSTGNILKAANTVIDN
NTGRLGKELWTEDAQGELISVYAGFNELDEARFIVSKIKDWLNQGNALTDTAILYRNNAQ
SRVLEEALLHEGLAYRIYGGLRFFERQEIKDALGYMRMVSHPHDDAAFERVVNTPSRGIG
EKTLSQVRDTARMHNCSMWQACQLLINEGGFKGRALNAMQSFVLLITELEQSTLDEPLDQ
QADKAIRQSGLYAMYQAERGEKAQARLENLEELVTACKTFIVPEEAEEMSPLAAFLAHAS
LEAGETQADKDQDAVQMMTIHTAKGLEFPLVFLAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMQKLYITYAESRRLYGQDKYHTASRFIREMPADCVEEVRLKSTISRPVHNRFS
QATSHASFEETGFSLGERVVHRKFGEGIVLNYEGSGEHGRVQVNFDEFGSKWLVLAYAKL
EKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctcgactgctagacgagctaaacgacaaacagcgtgaagcagtagcagcc
ccactatctaacgccctagttttggctggcgccggtagtggtaaaacccgcgtattagtg
catcgcattgcgtggttaatggaagtcgaaaacatcgcccctttttctattttggcagta
acctttaccaataaagcagccaaagaaatgcgcggccgaatagagtcgttgatgggtcgc
agcctgcacaatatgtggattggtaccttccacgggcttgcgcatcgcttactacgtgcg
caccatgcagaagccaacttgcctgagaattttcagataattgattcggacgatcaatat
cgacttattcgccgcattctgaaggccatgaacctggacgaaaagcattgggcgcctcgt
caaattcagtggtacataaatggcaacaaagacgaaggcttgcgccctcagcacattgaa
acccacggcgatcatattcaaaagaccatgcgcgaagtctatgcggcatatcaagacgct
tgtgaccgttcaggcttggtagattttgctgaactgttgctacgcgcacatgaattatgg
gctaaaaacccagaagtattagcccactatcaacgtcgtttccgtgcagtgttggtagac
gaattccaagataccaacaatatccaatatgcatggcttcgtatgctgtgtagtggtggt
aataataacattatgattgttggcgacgacgatcagtctatttacggctggcgcggcgca
aacgtagataatattcagcacttcctgaaagacttcaacgagcctaatactattcgcctt
gagcagaattaccgctctacaggaaacattcttaaagcggcgaacacggttatcgacaac
aatacgggccgtttagggaaagaactttggacggaagacgcgcaaggcgagctgatttct
gtatatgcgggtttcaacgagctagatgaagcgcgctttattgtttcgaaaatcaaagat
tggcttaatcaaggcaacgcccttactgataccgctattctttatcgaaacaacgcccag
tctcgagtactggaagaagccttgctgcacgaagggctggcgtatcgcatatacggcggt
ctgcgcttcttcgaacgccaagagattaaagacgcccttggctatatgcgtatggtgagc
cacccgcacgacgatgcagctttcgagcgtgtagtaaacaccccaagtcgcggtattggt
gagaaaaccttatcgcaagtgcgcgacaccgcgcgaatgcacaactgttcaatgtggcag
gcgtgtcagttgctcattaatgaaggtggctttaaaggccgcgcgctaaacgctatgcaa
agcttcgtgttgctaattactgagctagagcaatccacgttagatgagccccttgaccaa
caagccgataaggctattcgccagtctggtctgtacgccatgtaccaagcagagcgcgga
gaaaaggcccaagcacgtctagaaaacttagaagaattggttactgcatgtaaaactttt
atcgtgcctgaagaagccgaagaaatgtcgcctctggcagcctttctagctcatgcgtcg
ctggaagcaggtgaaacccaggcggataaagaccaggatgccgtgcaaatgatgaccatt
cacaccgctaaaggccttgaatttccactggtattcttagcaggtgtagaagaaggcatg
ttccctagccaaatgactaacgacgagccaggtcgaatggaagaggaacgcagactttgc
tatgttggtatgaccagagcaatgcaaaagttgtatattacttatgcagaaagtcgtcga
ctctatggccaagataagtatcatactgcttctcgatttattcgcgaaatgccagcagac
tgcgttgaagaggttaggctgaaatcgactatttcgcggcccgtgcacaaccgctttagc
caagcgacgtcgcacgccagttttgaagaaacgggctttagtttaggtgagcgagttgta
caccgtaaatttggcgaagggatcgtacttaactacgaagggagtggtgagcacggtcga
gttcaagtaaacttcgacgaatttggcagcaaatggctggtacttgcttacgcaaagctg
gagaaagcgtaa
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