Alteromonas macleodii English Channel 673: AMEC673_02110
Help
Entry
AMEC673_02110 CDS
T02254
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
amg
Alteromonas macleodii English Channel 673
Pathway
amg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMEC673_02110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amg03019
]
AMEC673_02110
Enzymes [BR:
amg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AMEC673_02110
Messenger RNA biogenesis [BR:
amg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMEC673_02110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFT73125
UniProt:
A0AB32ZUF1
LinkDB
All DBs
Position
complement(495219..496511)
Genome browser
AA seq
430 aa
AA seq
DB search
MPTHLTDTHFSDLPINGKVVDALAAANFSHCTPIQALALPPLLEGHDIAGQAQTGTGKTI
AFLVATFHYLLSKAENADNSKSNGPRAIIMAPTRELAVQIYNDAKLLSEHTGLSLGLIYG
GEGYQSQRETLEEGVDIIIGTTGRILDYYKQNVFTLKNIQVAVLDEADRMFDLGFIKDIR
FLFRRMPPASERLSMLFSATLSYRVQELAYEHMNNPTHVQVAPEQTTATRVSQELFYPSD
DDKMLLLLTLLEEEWPEKAIVFANTKNSCEKVTDWLTADGHRVGLLSGDVPQKKRLGILE
DFTKGNLDILVATDVAARGLHIDAVTHVFNYDLPDDAEDYVHRIGRTGRAGQSGVAISFA
CEKYALNLPAIEQYIQKAIPVTDYDRSALLDDVTPPKPRRRRTPNNRNSSRRGNGRGRGK
PQNRNNRAQQ
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcacttaactgatactcacttttctgacctgccgattaacggcaaggttgtt
gacgccttggcggcagctaatttttcacattgtacaccaattcaagcacttgcactgcct
cctttattggaaggtcacgacattgcaggtcaggctcaaaccggaaccggtaaaaccatt
gcctttttggtagctacatttcactatttgctaagcaaagcagaaaatgcagataacagc
aaatcaaatggccctcgcgcaattattatggcgccgaccagagagctcgccgttcaaatt
tataacgacgccaaactgcttagtgagcatactggattgtcgcttggtttgatttatggg
ggcgaaggttaccaaagtcaacgtgaaactttggaagaaggggtagatattataattggt
acgacaggacgcatactggattactacaaacagaatgtgttcacactgaagaatattcag
gttgccgtacttgatgaagccgaccgcatgttcgatttaggctttataaaggatatccgc
tttttattccgccgcatgccaccggcaagcgaacgtttgagcatgctattttcagctaca
cttagctaccgcgtgcaagagcttgcttacgagcacatgaacaaccctacccacgtacag
gtagcgccagaacaaacaactgcaactcgcgtttctcaagagctattttatccgtctgat
gacgacaagatgctgcttcttcttacgctgcttgaagaagaatggccagaaaaggcaatt
gtttttgccaacactaaaaatagctgtgagaaagttaccgactggcttaccgcagatggc
catcgcgtgggcttgcttagcggcgatgtaccacagaagaaacgccttgggatcttagaa
gatttcaccaaaggcaatcttgatattttagtcgcaaccgacgttgcagcgcgcggtctt
catatcgacgcggtaacgcacgtattcaactacgacttacctgacgacgccgaagactat
gtacaccgtattggtcgtactggccgtgcaggacaaagtggtgttgcaattagtttcgcg
tgcgaaaaatacgcattaaacttacctgctattgagcaatacattcaaaaggcaataccg
gttaccgattacgaccgcagtgctctacttgatgatgtaacgcctccaaaaccacgtaga
agacgtacgcctaacaaccgcaattcttcacgtcgtggaaacggaagaggccgtggaaag
cctcaaaaccgaaacaacagagcgcaacagtga
DBGET
integrated database retrieval system
