Alteromonas macleodii English Channel 673: AMEC673_04155
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Entry
AMEC673_04155 CDS
T02254
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
amg
Alteromonas macleodii English Channel 673
Pathway
amg00040
Pentose and glucuronate interconversions
amg01100
Metabolic pathways
amg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AMEC673_04155
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMEC673_04155
Enzymes [BR:
amg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AMEC673_04155
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AFT73528
UniProt:
A0AB32ZV58
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All DBs
Position
967666..969213
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AA seq
515 aa
AA seq
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MKKNLPIFQSTIIASSIAFAVSTSAVASGFHTQNGGTTGGQGGQVVQASTGKQIHEALCN
RNTSETPIIIQVSGTINHGNTEKVSGDSCNTAEDKIELKDIANVTLIGVGGGATFDQLGI
HIRNSQNIIIRNVHVKNVKKSGSPTSNGGDAIGIEKDVRNVWVDHVTLEASGGESDGYDG
LFDVKDNSKYITLSYSILRNSDRGGLVGSSESQVNNGPITYHHNIFDNLNSRVPLVRGAT
AHIYNNYYDGVRSSGINSRAGAEVKVENNYFENSKDPLGTFYTTTDGYWQVAGNTFGSGV
TWSDSDSDYEPAGPNVQSTASISIPYSYSLDGASCIRDILESTAGANKNLAVSDGSCGST
GGGGDTGGGDTGGGDTGGGDNGGGDDNSGGNPPSGTNLALNAQSDGSSKYSGTSYGNVRD
GDVSTYWSPSGTTGRISIKRLNTTVNTVRVIETSSTQGAVTSWQLVNNDTGSVLASGNSI
PSTISFSNTNLDKINFVIDSATQRPQIAEFEVYLD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacttacctatatttcaatcgacgataattgcatcatcaattgcctttgcc
gtctctacgtctgcagttgcttcaggttttcacacacagaatggaggcacgacaggcggt
caaggtggacaagtagtacaagcttctacgggtaaacaaattcacgaagcattgtgtaat
agaaacacctcagaaacgccaatcattattcaagtctcgggtacaatcaatcatggtaat
actgaaaaagtgtctggagacagctgtaataccgcagaagacaaaattgagttaaaagac
atcgcgaatgtgacacttattggtgtaggcggtggcgctacattcgaccagctaggtata
cacataaggaattcccaaaacatcattataagaaacgttcatgttaaaaatgtcaaaaaa
tcgggctcacccacgtcaaatggcggagacgcgatagggatagaaaaagacgttcgcaac
gtatgggttgaccacgtaaccttagaagctagtggtggtgagagtgatggttatgacggc
ttgttcgatgtaaaggataactcgaaatacatcaccttatcttacagcattttacgtaac
tcagatcgaggcggtctggtaggttcaagcgaatcacaagttaataacggtccgatcacc
tatcaccacaatatctttgacaatttgaactcgcgcgttccccttgtaaggggggcaaca
gctcacatttacaataactactatgacggcgttcgctcttcagggattaattcccgcgca
ggagccgaagtcaaagtagaaaacaactatttcgaaaatagtaaagatccactgggtacg
ttttatacaacaactgacggttattggcaggttgcgggaaacactttcggaagtggcgta
acgtggagcgactcagacagtgactatgaacctgcagggccaaacgttcaatctacagca
tcaatatctattccctatagttactcgctagatggggcatcttgtatacgagatattctt
gagagcaccgctggtgccaacaaaaatcttgcagtatcagacggtagctgcggttcaact
ggtggcggtggcgataccggaggtggtgatacaggaggtggcgacacagggggaggtgat
aatggtggcggcgatgataactcaggaggtaatccgccaagcggcaccaacttagcgtta
aatgcacaatctgacggtagctctaagtacagtggaacaagttacgggaacgtaagggat
ggggatgtatctacttactggtctccgagcggaacgacgggaagaattagcatcaaacgc
ttgaatacgacagtaaatactgtacgggtaattgagacctcttctactcaaggtgcggta
acatcatggcaacttgtgaacaatgacacaggcagcgtattggcatcaggaaactcaatt
ccaagtacgatttcgttttcaaataccaatttggataaaatcaactttgtcatcgattct
gcaacacaacgaccacaaattgcagagtttgaggtgtatttagattaa
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