Alteromonas macleodii English Channel 673: AMEC673_04250
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Entry
AMEC673_04250 CDS
T02254
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
amg
Alteromonas macleodii English Channel 673
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amg03009
]
AMEC673_04250
Enzymes [BR:
amg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AMEC673_04250
Ribosome biogenesis [BR:
amg03009
]
Prokaryotic type
rRNA helicases
AMEC673_04250
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AFT73547
UniProt:
A0AB32ZVI6
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Position
complement(987882..989108)
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AA seq
408 aa
AA seq
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MTFEELELDEALCHAAADMGFETPTSIQELVIPHALDGRDILASAPTGTGKTAAFLLPAC
QFLLDYPRRQPGATRILILTPTRELALQVYEQALAITKHTQIVCGVITGGINYGTDKETL
SKNLDILVATPGRLLEHIEKEAADCRDIECLILDEADRMLDMGFSTVVNQIAAEARWRKQ
NLLFSATLEGKGVKTFAHDILNNPEVIEANPSRKEKNKIHQWYHLADDMNHKQALLVNIL
KQETTTSAVVFVKTRERLQMLKDFLASKDIPVCWLQGEMPQDKRIAALARFKSGEVPILL
ATDVAARGIDVPNVSHVINFDMPRKADVYVHRIGRTGRAGAKGTAISLVEAHDFDMVAKT
ARYMGEPLKARVIDELRPKNKTPKIGPKKKKVKAKDKAKAKAKPKKKK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgaagaactcgaattagacgaagcactgtgtcacgcagctgccgatatgggg
tttgaaactccaactagcattcaagaactggttatcccgcatgcgttggatggacgagat
atcttggcctctgctcctacaggtactggtaaaacagccgctttcttattgcctgcatgc
cagtttttacttgattatccgcgcagacagcctggtgctacacgtattttgatcctaacg
cctacccgcgagttagcgctacaggtttacgaacaagccctagccataacaaagcataca
caaattgtgtgcggggtaataaccggtggtattaactacggtaccgataaagaaacctta
agcaagaatctcgatattcttgtggccacgccaggtcgtttgcttgagcatatcgaaaaa
gaagccgcagattgccgtgatatcgagtgtttaattcttgatgaagctgaccgcatgttg
gatatgggtttctcaacggtagttaaccaaattgctgccgaagcgcgctggcgcaagcaa
aacctattgttctctgccacgcttgaaggcaaaggcgttaagactttcgctcatgacatt
cttaacaatcctgaagtgattgaagcgaacccatcgcgcaaagagaagaacaaaattcat
cagtggtatcaccttgctgacgacatgaatcacaagcaagcattgctggtgaatattttg
aagcaagaaacaacgacgtcagcggttgtgtttgtgaaaacccgcgaacgcctgcaaatg
cttaaggacttcttagcctcgaaagatattccagtgtgctggctacagggtgaaatgcca
caagacaaacgtattgcagcgctagcccgtttcaaaagtggtgaagtacctatcttgctg
gcaacggatgttgctgcccgcggtattgatgtgcctaacgtgagccatgttattaacttc
gacatgccgcgcaaagccgacgtttatgttcaccgcattggcagaacaggccgcgctggc
gccaaaggtactgcaatatctttggttgaggcccacgattttgacatggtagccaaaacc
gcacgttacatgggcgaaccacttaaagctcgcgttattgacgagctacgccccaaaaac
aaaacgcctaaaattggcccgaaaaagaaaaaagtaaaggccaaagacaaagccaaggca
aaagctaagcctaaaaagaaaaagtaa
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