Alteromonas macleodii English Channel 673: AMEC673_12290
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Entry
AMEC673_12290 CDS
T02254
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amg
Alteromonas macleodii English Channel 673
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amg03016
]
AMEC673_12290
Enzymes [BR:
amg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AMEC673_12290
Transfer RNA biogenesis [BR:
amg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AMEC673_12290
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Paralog
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AFT75148
UniProt:
A0AB32ZZP0
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All DBs
Position
complement(2871376..2872533)
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AA seq
385 aa
AA seq
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MQYQLITTSEQLEKVCTAAQRQEAVALDTEFVRTKTLTPHLGLIQLYDGHQLVLIDPLAI
DNMQPFIDLMENTEVVKVLHSCSEDIEAFLTAFDTVPTPVFDTQLAGSILDMGPSLGYAK
LVELLCDISLDKGESRTDWLARPLREAQLSYAANDVLYLLPCYQQLASKVQEAGKVHWIY
QEIALLVDKKRAQMPEDFAYLSIKNNWRLNSEQLTVLQALAAWRLNTARKKDLALNFVFK
EGHLFEAAQRLIDSKSGLSRINGVNHQSVRRYGDTIITLIEEARAKYAQTPEKLRLPVVL
RLIDIAKYKKTLAELKVISDQIAKDNAVNSDVIASKKQLNQLLKWYWFSVDETRVQGLMP
DVLSTWREPLFRSHVTRLLGDAPAQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaattaattacaacatctgaacaactcgaaaaagtgtgcactgccgcacag
cgtcaagaggcggtagccttagacaccgaattcgtaagaacgaaaaccctcactcctcat
ttaggccttatccagctctatgatggccatcagctggtactcattgatccgctcgccata
gacaatatgcagccatttatcgatctcatggagaataccgaagtcgtaaaagtactgcac
tcgtgttctgaagacattgaggcgttccttaccgcttttgataccgtaccaacgcctgtg
ttcgacacgcagcttgcgggaagtattttggacatgggaccgtcacttggctatgcaaag
cttgtagagttgctgtgtgatatcagtttggacaaaggggagtcacgaaccgattggtta
gccagacctctacgtgaagcgcagcttagctacgcagcgaatgatgtgctgtatttactg
ccttgctaccaacagttagccagtaaagtacaagaggcggggaaagtgcactggatttac
caagagatcgctttgctagttgataagaagcgcgctcaaatgcctgaagattttgcgtac
ttaagcattaagaataactggcgattgaacagcgagcagctcaccgtattacaggcacta
gcggcatggcgcttgaataccgcacgaaaaaaagatctggccctaaacttcgtgttcaaa
gaagggcatttgtttgaagcggcgcagcgtcttatcgatagtaaatctggcctttcgcgt
attaacggcgtgaatcatcaatcggtacgccgctacggcgacaccatcatcacgctaatt
gaagaggcgagagcaaagtacgcgcaaacgccagaaaagctcagacttccggttgtgctg
cggttaattgatatcgccaagtacaaaaaaacgctggccgagcttaaagttatcagcgac
cagatagcgaaagacaatgctgtaaatagtgatgttattgcctctaaaaaacagctgaat
caactgttaaaatggtactggttttcggttgatgagacccgcgtgcagggactaatgccc
gatgtactgtcgacgtggagagagccattgtttcgctctcacgtaactcgtctacttggc
gacgctccggcccaatag
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