Alteromonas macleodii English Channel 673: AMEC673_17385
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Entry
AMEC673_17385 CDS
T02254
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
amg
Alteromonas macleodii English Channel 673
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amg03021
]
AMEC673_17385
Transcription machinery [BR:
amg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMEC673_17385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
GntR
HTH_3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AFT76157
UniProt:
A0AB33A371
LinkDB
All DBs
Position
complement(4091969..4092823)
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AA seq
284 aa
AA seq
DB search
MSNNLQSMALSVPHSGSIEGYIQAVSSIDMLSAEEERELAVRLREDEDLQAARKLVMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTHDEVQTVANELGVSTKEVLQMEARMSSQ
DQAFDLTADEDETGNFAPVQYLEDKSSDVETDVINNDWDTAASKRLYSAIKTLDERSQDI
IETRWLADNKITLQDLADKYQVSAERVRQIEKNAMKKLQAAMVA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaatttgcaatctatggccctgtcagtgccacacagcggtagcattgaaggc
tacatccaagctgtaagcagcattgatatgcttagcgctgaggaagagcgcgagttggca
gtgcgccttcgcgaagacgaagacttacaagccgctcgtaagctagtaatgtcacatctt
cgttttgtagtgcacattgcaaaatcttactcaggttatggcttaccacaagccgactta
attcaagaaggtaacatcggtctgatgaaagccgttaagcgtttcgacccaacggtgggc
gtacgtttggtttctttcgcggtacattggatcaaagcagaaattcatgagtttgtactt
aaaaactggcgaatagtgaaagttgcgacaaccaaagcgcagcgcaaactgttctttaac
cttcgtaaggcgaagaagcgtcttggttggtttactcatgacgaagtgcaaacagtagcg
aacgaattgggtgtgagtacaaaagaagtgcttcaaatggaagcgcgtatgagctctcaa
gaccaagcgttcgatttaactgcggatgaagatgaaacaggtaattttgcgccagttcag
tatttagaagacaaatcttcagatgttgaaactgacgtaatcaacaacgactgggataca
gcggcgagcaagcgcttgtactcagcgattaaaacgctagacgagcgtagccaagatatc
atcgaaactcgttggttagcagacaacaagattactctgcaagacttagctgataaatat
caggtttctgcagagcgtgttcgtcaaattgaaaagaacgcgatgaaaaagcttcaagca
gctatggtcgcgtag
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