Alteromonas mediterranea 615: I633_09195
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Entry
I633_09195 CDS
T02719
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amh
Alteromonas mediterranea 615
Brite
KEGG Orthology (KO) [BR:
amh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amh03016
]
I633_09195
Enzymes [BR:
amh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
I633_09195
Transfer RNA biogenesis [BR:
amh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I633_09195
Prokaryotic type
I633_09195
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGP77854
UniProt:
S5AEN9
LinkDB
All DBs
Position
1857433..1858404
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AA seq
323 aa
AA seq
DB search
MARRRKGRDINGIVLLDKPLGGSSNQLLQKVRWLYKAAKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAQLGVRTTTSDADGEVVEEKPVNVSEEQVRDACLAFLGKSKQ
IPSMFSALKHQGKPLYYYARQGIEIEREPRDIEVFELDVLRIELPYVDMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLEKLIEIQESLDDGEFKALDDLLIPM
DTAVSRLPFVTINDAERNRFDNGQSVKGECSEPLSEGTSYRVYHGVDTNAIFLGVGEGVL
DPKDQGIPKQEIFVNPKRRVVYS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgtcgtaaaggccgtgatattaacggcatagtattgcttgataaaccactt
ggtggttcttcgaatcagcttcttcaaaaagtgcgttggctttataaagcagccaaggcg
ggtcacacaggagcgcttgatcctctcgctagtggtatgctgcctttgtgtcttggtgag
gcgactaagttttctcagtttctgctcgatgctgagaaaacgtatgaagttacggcgcag
ctaggggtgcgtacaaccacctctgacgcagacggcgaagttgttgaggaaaagcccgtc
aatgttagcgaagagcaagtccgcgacgcatgccttgcttttttaggtaaaagcaaacaa
atcccgtctatgttttctgcactcaaacatcaaggtaagccgctgtattattatgcccga
caggggattgaaatagagcgagagccccgtgatattgaagtctttgagcttgacgtgttg
cgcattgagcttccttacgtggatatgcgaataaaatgcagcaaaggcacgtatatacgt
tcaatcgttgatgacttagggcaaaacttaggatgcggtgcctacgttacccgtttacat
cgtactgaagtggccgattatcctacggataaaatggtatcgcttgaaaagttaattgaa
atccaggagtcactagacgacggtgagtttaaagcacttgatgacttgctcattcctatg
gacaccgcggtaagtcgtctgccgtttgtgactatcaacgacgctgagagaaatcgcttt
gataatggacaatcggttaaaggagagtgtagcgagccacttagtgagggcacgtcttat
cgtgtttatcacggtgttgataccaacgccatcttccttggcgtaggggaaggggtactt
gacccaaaagatcagggtatacccaagcaagaaatattcgttaacccgaaacgtcgcgtt
gtttatagttag
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