Alteromonas mediterranea 615: I633_09900
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Entry
I633_09900 CDS
T02719
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amh
Alteromonas mediterranea 615
Brite
KEGG Orthology (KO) [BR:
amh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amh03032
]
I633_09900
03400 DNA repair and recombination proteins [BR:
amh03400
]
I633_09900
Enzymes [BR:
amh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I633_09900
DNA replication proteins [BR:
amh03032
]
Prokaryotic type
DNA Topoisomerases
I633_09900
DNA repair and recombination proteins [BR:
amh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I633_09900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AGP77972
UniProt:
S5ACK9
LinkDB
All DBs
Position
1995288..1996310
Genome browser
AA seq
340 aa
AA seq
DB search
MHEDDSHLSIKRIACGNKRFYYRYASGKKVTGQRVINRIKKLVIPPNWRDTFISRDSKAS
VQAIGYDEKGRKQYIYHEKWHEQQQVQKFERLIAFGNALPAFREHCISLISQSSWTLERA
CALVCLLLDYTGARVGNTQYSKENNTYGLTTLRRKHVQAQCNDSVELAYIGKHGKPRTLK
VNDPELASLICDCAQQQGYCLFRYQDHRKQWHDVTSEDVNAFIHEKLSEQFSCKDFRTWA
SSRFALTVMPNVYERVASSKTKKWESTLSKTVSAELGNTPAVCRKYYIHPKLFAIKNQGE
AFEKTLNRVRSLAGEDCIHITHLLPVEKLLLDVISTKSNE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgaagatgatagccacctatcaattaagcgcattgcgtgcggaaataaacgtttt
tactatcggtacgccagtggtaagaaagttaccggtcaacgtgtgataaaccgcataaag
aaactagttatcccaccgaattggcgagatacctttatcagccgcgacagtaaggcgagt
gttcaggcgattggatacgatgaaaaaggccgtaagcaatacatttatcatgagaagtgg
catgagcaacagcaggtacaaaagtttgagcggttgattgcttttggcaatgcccttcca
gcgtttcgagagcattgcatttctctcatttctcaatcttcctggacgctagagcgcgca
tgcgcgcttgtttgtcttttattagactacaccggcgctagggttgggaatacgcaatac
agcaaagagaacaacacctatgggcttaccacgctgcgacgcaaacacgttcaggcgcag
tgcaacgacagtgtagaacttgcgtacataggaaaacatgggaaaccgcgaaccctgaaa
gtgaatgacccagaattggcgtctttaatatgtgattgcgcacaacaacaaggttattgc
ttatttcgctatcaagatcaccgtaaacaatggcacgatgtaacgagcgaagatgtgaac
gcgtttatacatgagaagctgagcgaacaatttagttgtaaggactttaggacttgggcg
tcgagccgttttgccctaacggtgatgcccaacgtatatgaacgtgtagcaagttcaaaa
actaaaaagtgggaaagcacattaagtaaaaccgtatcagctgaactaggcaatacgcca
gcggtttgcagaaaatattatattcacccgaaactatttgctattaaaaaccagggggaa
gctttcgaaaagacgctaaatcgtgtgcgatcgctggctggtgaagattgtatacatatc
acgcacttactgcctgtagaaaagcttcttttggatgttatttctactaagagcaatgag
tga
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