Alteromonas mediterranea 615: I633_20360
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Entry
I633_20360 CDS
T02719
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amh
Alteromonas mediterranea 615
Pathway
amh03030
DNA replication
amh03430
Mismatch repair
amh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I633_20360
03430 Mismatch repair
I633_20360
03440 Homologous recombination
I633_20360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amh03032
]
I633_20360
03400 DNA repair and recombination proteins [BR:
amh03400
]
I633_20360
Enzymes [BR:
amh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I633_20360
DNA replication proteins [BR:
amh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I633_20360
DNA repair and recombination proteins [BR:
amh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I633_20360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FAN1_HTH
VRR_NUC
Rv2179c-like
RNase_H_2
RraB
Motif
Other DBs
NCBI-ProteinID:
AGP79601
UniProt:
S5AL94
LinkDB
All DBs
Position
complement(4154096..4156243)
Genome browser
AA seq
715 aa
AA seq
DB search
MRKDLPPRYYLTHFHEFLAFFEGASQSLLSSEAVRFIQRFKALDEDKQCIVVRAANRKYA
VIDRMQFNYGEIVAPQHQIDCLIKDGWFGDLTHATLNDIAGVLTKDALLALLSEYGSIQG
LASQRKPKLVNLLSEQITARGWPESFSLESYLVCLFDSALRFLLFIYFGNTKSRLNQFSM
RDLGVMRTRSDSVTDTARFESKDDALAAWFYANHSSQLAFYNHETLLSLADSEFPETEGV
SASFYRDQLLYALGLKVLEVNRDKGLNILALAQSDKAKEKWLRESYKDGNDGEVRRALEH
IIDNPQSDTLLAFAEDFYARKYHKKRTSTVTDMLRNASRTLAIDVSQNQQVERGVLAHYA
RQGVQGWRTENRLWRSLFGLTFWKQLYEEDTLVTEFDRRPLSLKQNNFYAKFEDSIETLL
DALDSKEKLRFHIHKMATQHYGKVNSLFMWSSHLLTPIEALIEHGSLSAIYALLRMMSKD
FESLRDGFPDIMVLDDSLRFEEIKAPGDQLRRNQLVSIQRLQQAGFDVAVTTVNWVRDPA
QPYVVVDIETTGGNNSYNRITEIGMVKLVGGKEVDRFQTLLNPQRRIPSSITRLTGISDD
MVADAPLFAEVADHIASFTEDAVFVAHNVNFDYGFIKQEFARLEQPFRRPKMCTVREMRR
THPGLSSYSLANLTKHFHIDMEQHHRALSDAKAAAELLKLAFEKDDEGFSVGDNV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagatttaccgccccgttattacctgacacattttcatgaatttctcgcgttc
tttgaaggggcgagccagtcgttattaagcagtgaagctgtgcgctttatccagcgtttc
aaagcccttgatgaggacaagcagtgtattgtggttcgcgcggctaatcgcaaatatgca
gtgatagatagaatgcagttcaattatggtgaaattgttgcccctcaacatcaaattgac
tgtttaattaaggacggctggtttggcgatttaactcacgctacgcttaatgacattgct
ggggttttgacaaaagatgccctgctcgcgcttttgtcagaatacggcagcattcaaggt
cttgcttctcagagaaaacctaaactcgtcaacttactgagtgagcaaattactgcccga
ggatggccagaaagtttttcacttgaaagctacttagtgtgtttattcgatagtgccctg
cgcttcttattgtttatttattttggtaacacaaaaagccgtttaaatcagttttctatg
cgcgaccttggggtaatgagaacacgctctgattctgttaccgacaccgcgcgctttgaa
agtaaagacgatgcactggccgcgtggttttatgccaatcattcaagccagcttgccttc
tataaccatgagacattgttatcgcttgcagatagcgaattcccagaaacagaaggggtg
tcagccagtttttatcgcgaccagctactttacgcactagggcttaaagtacttgaggtt
aaccgcgataaggggcttaacatactggcattagcgcaaagcgataaagcaaaagaaaag
tggctaagagaaagctataaagacggtaacgacggtgaagttcgacgcgctttagagcac
atcatagataatccccagtcagataccttgctggcttttgcggaagacttttatgcccgc
aaatatcataaaaagcgcaccagcaccgttaccgacatgctgagaaacgcaagtagaacc
ttagccatagatgttagtcaaaatcagcaggtagagcggggagtgctggcgcattatgcc
agacagggagttcaagggtggcgaacagagaaccgtttatggcgcagtttgtttggcctc
actttttggaagcagctttatgaagaagatactctggtcacggaatttgatagaaggccg
ctgtcgctgaagcaaaataatttttatgcaaagtttgaagatagcatcgagactttactc
gatgcgcttgatagcaaagaaaagctgcgctttcacatacataaaatggcaacccaacac
tacggtaaagtaaacagcttatttatgtggtcgagccatttgctgactcctattgaggcg
cttatagagcacggttcgctgagtgcgatatacgcattacttcgcatgatgagcaaagac
tttgaaagcctgcgagacggttttcccgatattatggtgttggatgattcgcttcgcttt
gaagaaataaaggcgccgggcgatcaactgcgccggaaccaattggtttctattcagcgc
ctacagcaagccggattcgacgtggctgttaccacggtaaattgggttcgcgacccagcg
cagccctatgttgtggtagacattgaaactacgggcgggaataacagctataaccgtatt
actgaaataggcatggttaagctagttgggggaaaagaggtagataggtttcaaacctta
ctcaatcctcagcgacgaataccaagtagtatcacgcgtcttacgggtatctctgacgat
atggttgccgatgcaccgcttttcgcagaagtagccgatcatatcgccagctttaccgaa
gatgctgtatttgtcgcgcataacgtaaattttgactatgggtttattaaacaggaattt
gcgagattagagcagccgttcaggcggcctaaaatgtgtactgtgcgggagatgcgccgc
acccacccggggttatcttcttattcattggcaaacctgactaagcattttcatatcgac
atggagcaacatcaccgcgcgctaagtgacgctaaagcggctgcagagcttcttaagcta
gcatttgagaaagatgatgaaggcttcagtgttggcgataatgtctag
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