Actinosynnema mirum: Amir_0343
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Entry
Amir_0343 CDS
T00957
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ami
Actinosynnema mirum
Pathway
ami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Amir_0343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_0343
Enzymes [BR:
ami01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Amir_0343
DNA repair and recombination proteins [BR:
ami03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Amir_0343
Prokaryotic type
Amir_0343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACU34312
UniProt:
C6WGJ6
LinkDB
All DBs
Position
complement(372629..373618)
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AA seq
329 aa
AA seq
DB search
MSRTTSPTTSRATNRTASATTATAAAGAAEDAAKPESAHLPPSVLNTWFAATARDLPWRD
PECTAWGVLVSEIMLQQTPVARVEPIWRVWLDKWPRPSDMAAASQGEVLRMWGKLGYPRR
ALRLHAAAQAVAAEHDDVVPDDVETLLALPGIGAYTARAVAAFAYGRRCPVVDTNVRRVV
ARAVHGAGDAGPPSTTRDLRDVEALLPEDEASAATYSAALMELGALVCTARTPRCSACPV
LGSCQWQRNGRPAYDGPAKAVQKFAGTDRQVRGRLLDVLRGTSEPVAKEVLDRAWSDAGQ
RDRCLHSLLVDGLVEQTAAGLFALPGEHE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcacgacgagtcccaccacgagccgcgcgacgaaccggaccgcgagcgccacc
accgccaccgccgcagcgggcgctgccgaggacgccgccaagccggagagcgcccacctt
cccccgtcggtgctgaacacctggttcgccgccaccgcgcgcgacctgccctggcgcgac
cccgagtgcaccgcctggggcgtcctggtcagcgagatcatgctccagcagacccccgtc
gcccgcgtcgagccgatctggcgggtctggctggacaagtggccgaggcccagcgacatg
gccgccgcctcccagggcgaggtgctgcgcatgtggggcaagctcggctacccgcgccgc
gccctgcgcctgcacgccgccgcccaggccgtcgccgccgagcacgacgacgtcgtcccg
gacgacgtggagaccctgctggccctgcccggcatcggcgcgtacaccgcgcgggccgtc
gccgccttcgcctacggccgccgctgcccggtggtggacaccaacgtccgccgcgtcgtg
gcgcgggccgtgcacggggccggggacgcgggcccgccgtcgaccaccagggacctgcgg
gacgtggaggcgctgctgcccgaggacgaggcgtcggccgcgacctactcggcggcgctg
atggagctgggcgcgctggtgtgcacggccaggaccccgcgctgctcggcgtgcccggtg
ctgggctcgtgccagtggcagcgcaacgggcggcccgcgtacgacgggcccgcgaaggcg
gtgcagaagttcgcgggcaccgaccggcaggtgcgcgggcggctgctggacgtgctgcgc
ggcacgtccgagccggtcgccaaggaggtgctggaccgggcctggtcggacgccggtcag
cgggaccggtgcctgcactcgctgctggtggacgggctggtcgagcagaccgccgccggg
ctgttcgcgctgcccggcgagcacgagtga
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