Actinosynnema mirum: Amir_0735
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Entry
Amir_0735 CDS
T00957
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ami
Actinosynnema mirum
Pathway
ami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Amir_0735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ami03000
]
Amir_0735
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_0735
Enzymes [BR:
ami01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Amir_0735
Transcription factors [BR:
ami03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Amir_0735
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Amir_0735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
ACU34698
UniProt:
C6WKU3
LinkDB
All DBs
Position
complement(813465..814790)
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AA seq
441 aa
AA seq
DB search
MLLDAERAYRAVASRDARFDGCFITAVRTTRIYCRPSCPATTPKQRNVEFYPTAAAAQSA
GYRACRRCLPDAVPGSPEWNLRADLAARAMRLIGDGVVERDGVPGLAARLGYSERHLSRV
LSVELGAGPLALARAHRAHSARLLIETTDLAFADVAFAAGFASVRQFNDTIRAVFAATPS
RLREARRTSGAAGRIELRLPYRPPFDAAGLLAFFRAEAVPGVEEVDGGVYRRSLRLPHGP
ATVALTPRDGHVLCSLRLGDLRDLGTAVSRVRRLLDLDADPQAVDAVLGADPALRGLVAA
RPGARVPGSVDGAETLLRELGHREAGEALEHPDGAVTHLYPAAVDTPVGRALASGGLVVD
VGRDADELLAELTAFPGVGEAVARRVVARVLGAPDVPLVAGGAAWRPWRSYAAVHLGALG
PRERDDLNGRSDSNERSRRTA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgctcctcgacgccgaacgcgcctaccgggcggtggcctcccgcgacgcccgcttcgac
gggtgcttcatcaccgccgtgcgcaccacccgcatctactgccgcccgtcctgccccgcg
accacgcccaagcagcgcaacgtcgagttctacccgaccgccgccgccgcccagtccgcc
ggttaccgggcgtgccgcaggtgcctgccggacgccgttccggggtcacccgagtggaac
ctgcgggcggacctcgcggcgcgggccatgcggctgatcggggacggggtcgtggagcgc
gacggcgtgccggggctggccgcgcggctcggctactcggagcggcacctgtcgcgggtg
ctgtccgtcgagctgggcgccgggccgctggcgctggcgcgggcgcaccgggcgcactcg
gcgcggctgctgatcgagaccaccgacctggcgttcgcggacgtggcgttcgcggccggg
ttcgcgtcggtgcggcagttcaacgacacgatccgggcggtgttcgcggccacgccctcg
cggctgcgcgaggcgcggaggacctcgggggctgccgggcggatcgagctgcggctgccc
taccggccgcccttcgacgccgccgggctgctggcgttcttccgcgccgaggcggtgccc
ggcgtggaggaggtcgacggcggcgtctaccggcgctcgctgcggctgccgcacggcccg
gccaccgtcgccctcaccccccgtgacgggcacgtgctgtgctccctccggctgggtgac
ctgcgggacctggggacggcggtgagccgggtgcggcggctgctcgacctggacgccgac
ccgcaggccgtggacgcggtgctcggggccgacccggcgctgcgcgggctggtcgcggcc
cgaccgggggcgcgggtgccgggcagcgtggacggggctgagacgctgctgcgggagctg
gggcaccgggaggcgggggaggcgctggagcacccggacggggcggtgacgcacctgtac
ccggcggccgtggacaccccggtcgggcgagcgctggccagcggcgggctggtggtggac
gtcgggcgggacgcggacgagctgctggccgagctgaccgcgttccccggcgtcggcgag
gcggtcgcgcggcgggtcgtcgcgcgggtgctgggcgcgccggacgtgccgctggtcgcg
ggcggggccgcgtggcgcccgtggcgctcctacgcggccgtgcacctcggcgcgctgggt
ccgcgtgagcgggatgacctgaacgggcgaagtgactcgaacgagcgaagcaggaggaca
gcgtga
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