Actinosynnema mirum: Amir_0928
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Entry
Amir_0928 CDS
T00957
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ami
Actinosynnema mirum
Pathway
ami03420
Nucleotide excision repair
ami03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Amir_0928
03430 Mismatch repair
Amir_0928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_0928
Enzymes [BR:
ami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Amir_0928
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amir_0928
MMR (mismatch excision repair)
Other MMR factors
Amir_0928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Motif
Other DBs
NCBI-ProteinID:
ACU34888
UniProt:
C6WMF4
LinkDB
All DBs
Position
1030491..1033121
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AA seq
876 aa
AA seq
DB search
MDRLLEGLDPEQRAAVEAPRGPVCVLAGAGTGKTRTITHRIAHLVARGHVAAGQVLAVTF
TARAAGEMRTRLRALGVPGAQARTFHAAALRQLRYFWPRVVGGDQWRLIDGNKLRMVAQA
AHRAGLSTESDSLRDLASEIEWAKASLIAPDDYPAAVARAQRDTPAPAPQVVRVYQGYER
IKNEAQLLDFDDLLLHTAAALEEHGGVAEEFRDRYRCFVVDEYQDVTPLQQRVLDAWLGQ
RDDLTVVGDANQTIYSFAGASPLPLLNFARRFPEATVVRLERDYRSTPQVVALANDVIKW
ARGRPAGSRLKLIGQRPEGPDPVFTEFDDEPGEAGAVARRVRELLDGGVSASEIAVLYRV
NAQSEVFEQALAEVGVPYQVRGGERFFQRPEVRQAVLALRSASTGGRYAAGLGDGAGPGA
GSGRGPGGDARPGAVSGAVDAAAAPTSTTADRVSPLRAGLSAGGVSAAGLPADASTPAGG
SRSAAHPALDAASGAGVASGASVASGTGAASGTGVAPGAGVASGTGAAHSWRPSATSAPA
PASAPAPASAPASAAASGPGPASVAAPASGAGPASSAAPLPPSPSPLPSPSPSPSPSSEL
PGLVRRVLAGVGLTDEPPAGGGAQRERWESLLALVELAEEFASAVPDADLRAFVTELDVR
AEAQHPPTVEGVTLASLHAAKGLEWDAVFLVGLVDGTMPIQHADGDEAAVEEERRLLYVG
VTRAREHLWLSWALSRAAGGRRYRRRSRFLHALVPEGHPASRVAAPPREPVQRKPRPECR
VCGSALIDSRAVKLGRCSSCPSDVDEELLVKLRRWRAGRARELKVPPYVVFTDATLLAIA
EQRPEDVAGLVSIAGIGASKLTRYGDDVLALVLGKH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggaccggctgctggagggactggacccggaacagcgggcggccgtcgaggcgccgagg
gggccggtgtgcgtgctcgcgggcgcgggcacgggcaagacccggaccatcacgcaccgc
atcgcgcacctggtcgcacgcggtcacgtggccgccgggcaggtgctcgcggtgaccttc
acggcccgcgccgccggtgagatgcgcacccggctgcgggcgctcggcgtgcccggcgcg
caggccaggaccttccacgccgccgcgctgcggcagctcaggtacttctggcccagggtc
gtcggcggcgaccagtggcggctgatcgacgggaacaagctgcgcatggtcgcccaggcc
gcgcaccgggcgggcctgtccaccgagtccgactcgctgcgcgacctggcgagcgagatc
gagtgggcgaaggcgtcgctgatcgcccccgacgactacccggccgccgtcgcgcgcgcc
cagcgcgacacgcccgcgcccgcgccgcaggtcgtgcgggtgtaccaggggtacgagcgg
atcaagaacgaggcgcaactgctcgacttcgacgacctgctgctgcacaccgccgccgcg
ctggaggagcacggcggggtggccgaggagttccgcgaccggtaccggtgcttcgtggtc
gacgagtaccaggacgtgacgccgctccagcagcgcgtgctcgacgcctggctcggccag
cgcgacgacctgaccgtggtcggcgacgccaaccagaccatctactccttcgccggagcc
tccccgctcccgctgctgaacttcgcccgccgcttccccgaggccaccgtggtgcgcctg
gaacgcgactaccgctcgacgccgcaggtcgtggccctggccaacgacgtgatcaagtgg
gcgcgcggcaggcccgccgggtcgaggctgaagctgatcggccagcgccccgagggccct
gacccggtgttcaccgagttcgacgacgagccgggcgaggcgggcgcggtcgcgaggcgg
gtgcgggagctgctggacggcggggtgtcggcgagcgagatcgccgtgctctaccgggtc
aacgcccagtcggaggtgttcgagcaggcgctggcggaggtcggcgtgccgtaccaggtg
cgcggcggcgagcgcttcttccagcggccggaggtcaggcaggccgtgctggccctgcgc
tcggcgtcgacgggcggccggtacgcggctggtctgggggatggtgctggtccgggggcc
gggtcgggccggggaccgggcggtgacgcgcggccgggcgcggtttccggcgctgtggac
gccgccgctgccccgacctcgaccaccgccgaccgggtgtccccgctcagggcggggctg
agcgcgggcggggtctcggccgccggcctccccgccgatgcctcgacgcccgctggcggc
tcgcgctcggccgcccacccggcgctcgacgcggcctccggtgccggcgtggcctccggt
gccagcgtggcctccggcaccggcgcggcttccggcaccggcgtggcccccggtgctggc
gtggcctctggtaccggcgccgcgcactcctggcggccgagcgcgacgtccgctcccgcg
cccgcctccgctcccgcgcccgcctccgcgcccgcctccgccgccgcgtccgggccaggg
cccgcctccgtcgccgcgcccgcgtccggggcagggcccgcctcctcagccgcgcccctc
cccccgtccccgtcccctctcccgtccccgtccccgtccccgtccccgtcgagcgaactg
cccggcctggtgcgccgggtgctggccggggtcgggctgaccgacgagccgcccgccggt
ggtggggcccagcgcgagcggtgggagtcgctgctcgcgctggtcgagctggccgaggag
ttcgcgtccgccgtgccggacgccgacctgcgcgccttcgtcaccgagctggacgtgcgc
gccgaggcgcagcacccgccgaccgtcgagggcgtcaccctggcgtcgctgcacgccgcc
aagggcctggagtgggacgcggtgttcctggtcgggctggtcgacgggaccatgccgatc
cagcacgccgacggcgacgaggccgcggtcgaggaggagcgcaggctgctctacgtgggc
gtcacgcgcgcccgcgagcacctgtggctgtcctgggcgctgtcccgcgccgccggtggc
cgccggtaccgcaggcgcagccggttcctgcacgcgctcgtgcccgaggggcacccggcg
tcgcgggtcgcggcgccgccgcgcgagccggtgcagcgcaagccgaggcccgagtgccgg
gtgtgcgggtcggcgctgatcgactcgcgggcggtgaagctggggcgctgctcctcgtgc
ccgtccgacgtcgacgaggagctgctggtgaagctgcgccggtggcgggccgggcgggcg
cgcgagctgaaggttcccccgtacgtggtgttcaccgacgcgaccctgctggcgatcgcc
gagcagcggccggaggacgtcgccggactggtgtccatcgcgggcatcggggcctcgaag
ctcacccgctacggcgacgacgttctggcccttgtcctggggaaacactga
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