Actinosynnema mirum: Amir_1378
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Entry
Amir_1378 CDS
T00957
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ami
Actinosynnema mirum
Pathway
ami03030
DNA replication
ami03430
Mismatch repair
ami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amir_1378
03430 Mismatch repair
Amir_1378
03440 Homologous recombination
Amir_1378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ami03032
]
Amir_1378
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_1378
Enzymes [BR:
ami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amir_1378
DNA replication proteins [BR:
ami03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Amir_1378
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Amir_1378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACU35330
UniProt:
C6W9G7
LinkDB
All DBs
Position
complement(1519203..1520939)
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AA seq
578 aa
AA seq
DB search
MSGVTVPGMPTTPPAQLSFDELGTPLRETTFVVFDLETTGPRAAEDGITEIGAVKVRGGR
VIGEFGTLVDPERGIPPQIVALTGITQNMVTGAPVLASVLPAFLEFAEGAVLVAHNSGFD
VGFMKAACERHGYAWPKPPVVCTVKLARRVLSREEAPSCKLSALSALFGVPEAPNHRALV
DARATVEVLHRLLERVGSVGVHSLEELLAYLPDVSPQQRRKRSLAADLPSAPGVYLFRGP
SEEVLYVGTASDLRRRVRQYFTASETRHRLREMVALAVRVDWVECAHPLEAQVRELRLIA
AHRPAYNRRSKNTASWWLALTDEAFPRLSVVRTAREGALGPFPTRRAADAAAEALLEAVP
LRACAQRIPARGASGTPCALLEMGRCKAPCAGLQEVDDYADAVARARALIAGESTEALGG
AAARLGELALEERFEEAALRRDRLAGLVRALDRGQRLAALAAVEELVAARPDGAGGWWFA
VVRHGRLASAGVAPRGVPPMPVVDALVASAETVLPGAGPLLGGSAEEVGVVLRWVEQPGT
RMVSCSRPWAAPAWGAGSWRTWVGVAEAGRDQYRFEGH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggggttaccgtgcccggaatgccgaccacgccgcccgcgcagctgtcgttcgac
gagctgggcaccccgctgcgggagaccacgttcgtcgtcttcgacctggagacgaccggt
ccgcgcgcggccgaggacggcatcaccgagatcggcgcggtgaaggtgcgcggcgggcgg
gtgatcggcgagttcggcacgctcgtcgacccggagcgcggcatcccgccgcagatcgtc
gcgctgaccggcatcacccagaacatggtgaccggcgcgcccgtgctcgcctcggtgctg
cccgcgttcctggagttcgccgagggcgcggtgctggtggcgcacaactccgggttcgac
gtggggttcatgaaggccgcctgcgagcggcacggctacgcctggcccaagccgccggtg
gtgtgcacggtcaagctggccaggcgggtgctcagccgcgaggaggcgcccagctgcaag
ctgtccgcgctgtccgccctgttcggggtgcccgaggcgccgaaccaccgggcgctggtc
gacgcccgcgccaccgtggaggtgctgcaccggctgctggagcgggtcgggtcggtgggc
gtgcactcgctggaggagctgctggcgtacctgccggacgtgagcccgcagcagcgccgc
aagcgctcgctggccgccgacctgccgtccgcgccgggcgtgtacctgttccgggggccc
agcgaggaggtgctgtacgtcggcacggcctcggacctgcgcaggcgggtgcggcagtac
ttcaccgcctccgagacccggcaccggctgcgcgagatggtggccctggcggtgcgggtg
gactgggtggagtgcgcgcacccgctggaggcgcaggtgcgggagctgcggctgatcgcc
gcgcaccggcccgcctacaaccgccggtcgaagaacaccgcctcctggtggctggcgctg
accgacgaggcgttcccgaggctctcggtggtgcggacggcccgcgagggcgcgctggga
ccgttcccgaccaggcgggcggcggacgcggcggcggaggcgctgctggaggccgtgccg
ctgcgggcgtgcgcccagcgcatcccggcgcgcggggcgtcgggcacgccgtgcgcgctg
ctggagatggggcgctgcaaggccccgtgcgcggggctgcaggaggtcgacgactacgcg
gacgcggtggcgcgggctcgggcgctgatcgccggggagtccaccgaggcgctcggcggc
gcggcggccaggctgggcgagctggcgctggaggagcggttcgaggaggcggccctgcgg
cgggaccggctggccgggctggtgcgggcgctggaccgggggcagcggctggccgcgctc
gccgcggtggaggagctggtggcggcgcggccggacggcgcgggcggctggtggttcgcg
gtggtgcggcacggcaggctggccagcgccggggtggccccgcgcggggtgccgccgatg
ccggtggtggacgcgctggtggcgtcggcggagacggtgctgcccggcgcgggcccgctg
ctgggcggcagcgccgaggaggtcggcgtggtgctgcggtgggtggagcagccggggacc
cggatggtgagctgctcgcgcccgtgggcggcgcccgcgtggggcgcggggagctggcgg
acctgggtgggcgtggccgaggcgggacgcgaccagtaccggttcgaggggcactag
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