Actinosynnema mirum: Amir_1383
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Entry
Amir_1383 CDS
T00957
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ami
Actinosynnema mirum
Pathway
ami00061
Fatty acid biosynthesis
ami00071
Fatty acid degradation
ami01100
Metabolic pathways
ami01212
Fatty acid metabolism
ami02024
Quorum sensing
ami04146
Peroxisome
Module
ami_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Amir_1383
00071 Fatty acid degradation
Amir_1383
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Amir_1383
09145 Cellular community - prokaryotes
02024 Quorum sensing
Amir_1383
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ami01004
]
Amir_1383
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ami04147
]
Amir_1383
Enzymes [BR:
ami01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Amir_1383
Lipid biosynthesis proteins [BR:
ami01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Amir_1383
Exosome [BR:
ami04147
]
Exosomal proteins
Exosomal proteins of breast milk
Amir_1383
Exosomal proteins of breast cancer cells
Amir_1383
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACU35335
UniProt:
C6W9H2
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All DBs
Position
complement(1526877..1528685)
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AA seq
602 aa
AA seq
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MREFSVPATASVAPEDNLTDMVWANAERFGNAVSFRRRVDGTWVDVTSRDYAAQVLAVAK
GMVSAGIEPGDRVGLMSKTSYEWTLLDQAIWHAGAVVVPIYETSSAEQVEWILSNSGAKA
VFVETGAHRALLEPLAPDLPELRHVWQLESGSGSAGGAVDELTALGAEVSDEDAHARRRV
AGADDVATIVYTSGTTGKPKGCELTHRNLLSEIREAVTLMPHLLQAGNTLLVFLPLAHIL
ARVLALCALYTRVTVGHTQDVRKLVEDLGTFRPTFVVAVPRVFEKVYNGAKQKAEAEGKG
KIFAIAEATAVEYSRAEETGGPGLLLKVKHAVFDKLVYRRLKAALGGRCIAAVSGGAPLG
ERLAHFFRGIGVPVMEGYGLTETTAAACLNTATAVRVGTVGKPVGGTSVRIGEDGEVLIK
GDVVFRSYWDNPKATEEALEDGWFHTGDIGELDADGFLKITGRKKEIIVTAGGKNVSPAV
LEDRLRAHPLISQCMVIGDAQPFIGALITIDPEFFPSWLERNNRPAGTAVADVVEDEQLL
KEIQAAVDDANLAVSKAESIKKFRVLPVDFTEAGGEMTPSMKLRRSVVANTYKADIEAIY
SR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagttcagcgttcccgctaccgcgtcggtggcgcctgaggacaacctcaccgac
atggtgtgggcgaacgcggagcgcttcggcaacgcggtcagcttccgcaggcgcgtggac
ggaacgtgggtcgacgtgacctcgcgtgactacgccgcgcaggtgctggcggtcgccaag
ggcatggtctccgccgggatcgagccgggtgaccgggtcgggctgatgtcgaagaccagc
tacgagtggaccctgctcgaccaggcgatctggcacgcgggcgccgtggtggtgccgatc
tacgagacctcctccgctgagcaggtcgagtggatcctgtcgaactccggcgcgaaggcc
gtgttcgtcgagacgggcgcccaccgcgcgctgctggagccgctcgcgcccgacctgccg
gagctgcggcacgtctggcagctggagtccggctcgggctcggcgggcggcgcggtggac
gagctgaccgcgctgggggccgaggtgtccgacgaggacgcccacgcccggcggcgggtc
gcgggcgcggacgacgtcgcgacgatcgtctacacctcgggcaccacgggcaagcccaag
ggctgcgagctgacccaccgcaacctcctctcggagatccgcgaggcggtcacgctgatg
ccgcacctgctgcaggcgggcaacacgctgctggtgttcctgccgctcgcgcacatcctg
gcccgcgtgctggccctgtgcgccctgtacacgcgggtcaccgtcggccacacccaggac
gtgcgcaagctcgtcgaggacctgggcacgttccgcccgacgttcgtcgtcgcggtgccg
cgcgtgttcgagaaggtctacaacggggccaagcagaaggccgaggccgagggcaagggc
aagatcttcgcgatcgcggaggcgaccgccgtcgagtacagccgcgcggaggagaccggc
ggtcccggcctgctgctcaaggtcaagcacgcggtgttcgacaagctcgtgtaccgcagg
ctcaaggcggcgctgggcggccggtgcatcgcggcggtgtccggcggcgcgccgctgggc
gagcggctggcgcacttcttccggggcatcggcgtgccggtcatggagggctacggcctg
accgagaccacggcggcggcgtgcctgaacacggcgacggcggtccgggtcggcacggtc
ggcaagccggtgggcggcacctcggtgcgcatcggcgaggacggcgaggtgctgatcaag
ggcgacgtggtgttccggagctactgggacaacccgaaggccaccgaggaggcgctggag
gacggctggttccacaccggcgacatcggcgagctggacgccgacggcttcctgaagatc
accggccggaagaaggagatcatcgtcaccgccggtggcaagaacgtctccccggccgtg
ctggaggaccggctgcgggcgcacccgctgatcagccagtgcatggtgatcggcgacgcg
cagccgttcatcggcgcgctgatcacgatcgacccggagttcttcccgtcctggctggag
cgcaacaaccggcccgcgggcaccgcggtcgcggacgtggtcgaggacgagcagctgctc
aaggagatccaggcggcggtggacgacgcgaacctggcggtgtccaaggcggagtcgatc
aagaagttccgcgtgctgccggtggacttcaccgaggccggtggcgagatgacgccgagc
atgaagctgcgccggtcggtcgtggcgaacacctacaaggccgacatcgaggcgatctac
tcccgctag
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