Actinosynnema mirum: Amir_1444
Help
Entry
Amir_1444 CDS
T00957
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ami
Actinosynnema mirum
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ami03016
]
Amir_1444
Enzymes [BR:
ami01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Amir_1444
Transfer RNA biogenesis [BR:
ami03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Amir_1444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Copper-bind
Motif
Other DBs
NCBI-ProteinID:
ACU35395
UniProt:
C6WAC8
LinkDB
All DBs
Position
complement(1594531..1596006)
Genome browser
AA seq
491 aa
AA seq
DB search
MQGPKKFEIRTFGCQMNVHDSERLAGMLEAAGYAAASGGESADVVVFNTCAVRENADNKL
YGTLGHLAPAKAANPDMQIAVGGCLAQKDQAAIVKRAPWVDVVFGTHNIGSLPVLLERAR
HNREAQVEILDSLETFPSTLPARRDSAYSGWVSVSVGCNNTCTFCIVPSLRGKEKDRRPG
EVLAEVQALVAEGVLEVTLLGQNVNSYGVEFGDRYAFGKLLRACGDVEGLERVRFTSPHP
KDFTDDVIAAMAETPNVCHQLHMPLQSGSDRVLKEMRRSYRTGRYLSILENVRAAMPDAA
ITTDIIVGFPGETEADFQATLDVVREARFSSAFTFQYSKRPGTPAAELPDQLPKQVVQER
YDRLVTLVNELAWAENKAQVGRVVEVLASAGEGRKDTETNRMSGRARDGKLVHFTPGDAR
VRPGDVVETAITYGAPHNLIADGELISHRRTRAGDRSEAGERPTTQGVTLGLPSFGAPAP
QPVAVGGCSVG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggccgaagaagtttgagatccgcactttcgggtgccagatgaacgtgcacgac
tcggagcggctggccgggatgctggaggcggcgggctacgcggcggcgtccggcggcgag
agcgcggacgtggtcgtgttcaacacctgcgccgtgcgggagaacgccgacaacaagctg
tacggcacgctcgggcacctcgcgcccgcgaaggccgccaacccggacatgcagatcgcc
gtcggcggctgcctcgcccagaaggaccaggccgcgatcgtcaagcgcgccccctgggtg
gacgtcgtgttcggcacccacaacatcggctcgctgccggtgctgctggagcgggccagg
cacaaccgcgaggcccaggtggagatcctggactcgctggagaccttcccgtcgacgctg
cccgcccgccgcgactcggcgtactcgggctgggtgtcggtgtcggtgggctgcaacaac
acctgcaccttctgcatcgtcccgtcgctgcgcggcaaggagaaggaccgccgccccggc
gaggtgctggccgaggtgcaggctctggtggccgagggcgtgctggaggtgacgctgctc
gggcagaacgtcaactcctacggcgtcgagttcggcgaccggtacgcgttcggcaagctg
ctgcgcgcctgcggcgacgtggagggcctggagcgggtccggttcacctcgccgcacccg
aaggacttcaccgacgacgtgatcgcggcgatggccgagaccccgaacgtgtgccaccag
ctgcacatgccgctgcagtccggttcggaccgggtgctcaaggagatgcgccgctcgtac
cggaccggccgctacctgtcgatcctggagaacgtgcgcgcggccatgccggacgcggcg
atcaccaccgacatcatcgtgggcttccccggcgagaccgaggcggacttccaggccacg
ctggacgtggtgcgcgaggccaggttctccagcgccttcacgttccagtactcgaagcgg
cccggcactcccgccgccgagctgcccgaccagctgcccaagcaggtcgtgcaggagcgc
tacgaccggctggtgacgctggtcaacgagctggcgtgggcggagaacaaggcgcaggtc
ggcagggtcgtggaggtactcgcctcggcgggcgagggccgcaaggacaccgagaccaac
cggatgtccggccgggcccgcgacggcaagctcgtgcacttcacccccggcgacgcgcgc
gtgcggccgggcgacgtggtcgagaccgcgatcacctacggcgcgccgcacaacctgatc
gccgacggcgagctgatcagccaccggcggaccagggcgggcgaccgctccgaggccggg
gagcggccgaccacgcagggcgtgacgctcgggctgccgtcgttcggcgcgcccgcgccg
cagccggtcgcggtgggcgggtgctcggtcggatga
DBGET
integrated database retrieval system
