Actinosynnema mirum: Amir_1843
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Entry
Amir_1843 CDS
T00957
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ami
Actinosynnema mirum
Pathway
ami00040
Pentose and glucuronate interconversions
ami01100
Metabolic pathways
ami02020
Two-component system
ami02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Amir_1843
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Amir_1843
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Amir_1843
Enzymes [BR:
ami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
Amir_1843
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Amir_1843
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
DUF4987
Motif
Other DBs
NCBI-ProteinID:
ACU35791
UniProt:
C6WE48
LinkDB
All DBs
Position
2027491..2029683
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AA seq
730 aa
AA seq
DB search
MRIPRYALVLSCVLAGLVAPPALAGQDPEAAGRDPSRQVLQPGDGWGSAGSGTTGGSAAS
TPVVVRTAAELRAALAAPAPRIVKIKGVIDVSGNCASYETDGYSLKAYLDAYDPAVWGRD
REPSGPLEDARAASAKRQAEAIRFDVGSDTTLIGDGPGAGITGGNLRIAGARNVIVRHLT
FRDTSDCFPQWDPTDTAVGNWNSEYDSVGVIGSTNVWADHNTFTDQPNPDSSAPIHFDRP
FQRHDGQLDITNGSDLVTVSRNRFEDHGKTMLIGSSNSSTVDPGKLRVSVHHNVFANVEE
RAPRVRFGKVHVYNNRYEPGATHVYTWGAGVQSQLYVQNNHVELPKGVGADELLYNWGGT
AVTAKGNLVDGRPTDVVAAFNAANPDKQLAPDAGWTPELTRGLEPAHRVRDLQAGARQAE
LVVGRGPGAHRTVQSAIDAAPAFGTITLQKGHYREVVKVPAAKRGLTLRGATGRASDVVI
DYDNASGTKKPDGTTYGTTGSATATIEAADFTARNLTFSNSFDRAEHPEITATQAVAVKA
TGDRQLYDRVTFLGHQDTLYADSPNTATRARQYYRDCAISGDVDFLFGRATAVFDRATIT
ALSRGSDPNGYITAASTRRDNEFGFLITDSTIRSDAARGTYHLGRPWHPGGDVDAIAQVV
VRDTELPAAVKAAPWTDMSGFSWRDARFAEHRNTGPGSGTGADRPQLTPEQAERYTARAY
LSGDDGWNPA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcccgaggtatgcgctggtgctttcctgcgtgctggccgggctggtcgccccg
cccgccctcgcaggtcaagaccctgaagccgcaggtcgcgacccctcccggcaggtgctg
cagcccggtgacggctggggttcggcgggcagcgggaccaccgggggctccgccgcgagc
acacccgtggtggtgcggacagcggccgagttacgcgcggcgctggccgctccggcaccc
cggatcgtcaagatcaagggggtgatcgacgtcagcgggaactgcgcatcctatgaaacc
gacggctattccctgaaggcctatctggacgcttacgaccccgctgtctgggggcgcgac
cgggagccgtccgggccactggaggacgcgcgcgccgcttcggccaagcggcaggccgaa
gcgatccggttcgacgtcggctccgacaccacgctcatcggcgacggccccggcgcgggc
atcaccggcgggaacctgcggatcgcgggcgcccgcaacgtgatcgtccgccacctcacc
ttccgcgacaccagcgactgcttcccccagtgggacccgaccgacacggccgtgggcaac
tggaactccgagtacgactcggtcggcgtgatcggctccacgaacgtctgggccgaccac
aacaccttcaccgaccagcccaacccggacagctcggcgccgatccacttcgaccgcccg
ttccagcgccacgacggccagctcgacatcaccaacggctccgacctggtcaccgtgtcc
cgcaaccggttcgaggaccacggcaagaccatgctgatcggctcgtccaacagctccacg
gtcgaccccggcaagctgcgggtctccgtgcaccacaacgtgttcgccaacgtggaggag
cgcgcgccccgcgtgcggttcggcaaggtgcacgtctacaacaaccgctacgagcccggc
gcgacccacgtctacacctggggcgcgggcgtccagtcgcagctctacgtgcagaacaac
cacgtcgagctgcccaagggagtcggcgcggacgagctgctctacaactggggcggcacc
gccgtcaccgcgaagggcaacctggtcgacggccggcccaccgacgtcgtcgccgccttc
aacgccgccaacccggacaagcagctcgcccccgacgcgggctggaccccggagctcacc
aggggcctcgaacccgcgcaccgggtccgcgacctgcaagcgggcgcgcgccaggcggag
ctcgtcgtcggccggggccccggcgcccaccggaccgtgcagtccgcgatcgacgccgcc
cccgcgttcggcacgatcaccctgcagaagggccactaccgcgaggtcgtcaaggtcccg
gcggccaagcgcggcctgaccctgcgcggcgccaccgggcgcgcctccgacgtcgtcatc
gactacgacaacgccagcggcaccaagaagcccgacggcaccacctacggcaccaccggc
agcgccaccgcgaccatcgaggccgccgacttcaccgcgcggaacctgaccttcagcaac
tccttcgaccgcgcggagcacccggagatcaccgcgacccaggccgtcgcggtcaaggcc
accggcgaccggcagctctacgaccgggtcaccttcctcggccaccaggacaccctctac
gccgactcgcccaacaccgccacccgcgcccgccagtactaccgcgactgcgcgatcagc
ggcgacgtggacttcctgttcggccgcgccaccgccgtcttcgaccgcgccaccatcacc
gcgctcagcaggggcagcgaccccaacggctacatcacggccgcgagcaccaggcgcgac
aacgagttcggcttcctgatcaccgactccacgatccgcagcgacgccgcgcgcggcacc
taccacctcggccgcccctggcaccccggcggcgacgtcgacgccatcgcccaggtcgtc
gtgcgcgacaccgagctgcccgccgccgtgaaggccgcgccgtggaccgacatgtccggc
ttctcctggcgggacgcgcgcttcgccgagcaccgcaacaccggccccggctcgggcacc
ggcgcggaccggccgcagctcacccccgagcaggccgagcgctacaccgcgcgcgcctac
ctgtccggcgacgacgggtggaaccccgcatga
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