Actinosynnema mirum: Amir_1848
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Entry
Amir_1848 CDS
T00957
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ami
Actinosynnema mirum
Pathway
ami00040
Pentose and glucuronate interconversions
ami01100
Metabolic pathways
ami02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Amir_1848
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Amir_1848
Enzymes [BR:
ami01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Amir_1848
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
ACU35796
UniProt:
C6WE53
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All DBs
Position
2033980..2034933
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AA seq
317 aa
AA seq
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MHQKSTRVHWRTGLVAAAVVLAGASVAAPSAGAASFNLEGWATQGGGTTGGGSASPTTVT
SASQFTTAVQASGAAVIRFSGTINLSSMTKVASNKTILGVGSGATITGQGLNIANASNVI
VRNVNFRNWGDDAINVQYSTRVWLDHNSFANGSDGALDVKRASDYVTVSWNKFSSHDKTM
LLGHSDDNASEDTGKLRVSYHHNWFDGTNQRHPRVRFGNPVHVYNNYYGGVTSYGVASTK
DAGVLVEGNYFENTEDPFHRGEGSSPAAPLVARNNHFVNSGSGDQGGSVKAIPYSYALDA
ASSVKSVVTGGAGTGKI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagaagtcaacccgcgtgcactggcgcaccgggctcgtcgccgccgccgtcgtg
ctggcgggcgcgtccgtcgccgcccccagcgccggcgcggcctcgttcaacctcgagggt
tgggcgacgcagggcggcggcaccaccggtggaggcagcgcctccccgacgaccgtcacc
agcgcctcgcagttcaccacggcggtgcaggcgtcaggagcggccgtcatccggttctcc
ggcacgatcaacctgtccagcatgaccaaggtcgcgtccaacaagacgatcctcggcgtc
ggctccggcgccacgatcaccgggcagggcctgaacatcgccaacgcgtccaacgtgatc
gtgcgcaacgtcaacttccgcaactggggtgacgacgcgatcaacgtgcagtactcgacg
cgggtgtggctcgaccacaactcgttcgccaacgggtcggacggcgcgctggacgtcaag
cgggcctcggactacgtcacggtgtcctggaacaagttcagcagccacgacaagaccatg
ctgctcgggcacagcgacgacaacgcgtccgaggacaccggcaagctgcgcgtgagctac
caccacaactggttcgacggcaccaaccagcggcaccccagggtgcggttcggcaacccc
gtgcacgtgtacaacaactactacggcggggtgacctcgtacggcgtcgcgtcgaccaag
gacgcgggcgtcctggtcgagggcaactacttcgagaacaccgaggacccgttccaccgg
ggtgagggctcgtcgcccgcggccccgctggtggcgcggaacaaccacttcgtgaactcg
ggcagcggcgaccagggcggttcggtcaaggcgatcccctactcgtacgcgctggacgcg
gcgagctcggtcaagtccgtggtgaccggcggcgcgggcaccggcaagatctga
DBGET
integrated database retrieval system
