Actinosynnema mirum: Amir_1868
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Entry
Amir_1868 CDS
T00957
Name
(GenBank) cellulose-binding family II
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ami
Actinosynnema mirum
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Amir_1868
Enzymes [BR:
ami01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Amir_1868
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
CBM_2
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
ACU35816
UniProt:
C6WE73
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All DBs
Position
2062832..2065066
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AA seq
744 aa
AA seq
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MLTNSFRARLGAAVAAATALSGGLVVVGTASAAPACKVDYTVQNQWQGGFSANVTVTNLG
DPVDGWSLAWTAASGEKVDQGWNAAFSSSGTSITASNVDWNRAIPTGGSVSFGFNGSRTG
EPVVPSSFALNGTTCTGGVAPTTTTTPGGPTTTTGPTTTTTGGGTAPLPDPTGRKQVERL
DRGLISVRSGSGNLVSWRLLGGDPQNVAFTVYRGGAKLTASPITGSTNYLDSGAPADASY
TVRAVVNGVEQPASPASLAFGNGYRDVPIQPPSGSYAANDASVGDLDGDGVYEFVLKWEP
NNAKDNSQSGVTDVVYVDAYKLNGARLWRVNLGRNIRAGAHYTQFQVYDYDGDGKAEVAM
KTADATVDGRGTVIGNASADHRNSSGYVLAGPEYLTMFNGQTGAAMSTVDYDPPRGTVAD
WGDNYGNRVDRFLAGTAYLDGARPSLIMARGYYTRAVIAAWDFRNGALTKRWVFDSKASG
NSGYAGQGNHSLTIGDVDADGRDEIVYGAAAVDDSGKGLWNTGLGHGDAAHLGDLDPSRA
GLEYFKVDEDTSKPGSFFADARTGSRVWTTASGGDNGRGVAGDIWAGSPGAEAWSARDAN
LRSAKGAEIGRKPGSINFLAWWDGDPVRELVDQTRIDKYGTGGDTRLLTASDVHSNNGTK
ATPSLSGDLFGDWREEVVWPTTNNTALRIHSTPHQTDRRIPTLMHDTMYRVAIAWQNTAY
NQPPHPSFFIGDGMATPPWPDVHY
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaccaactcgttccgcgcgcggttgggcgcggccgtcgccgccgccaccgcgctg
agcggcggactggtcgtcgtgggcacggcttcggccgccccagcctgcaaggtcgactac
accgtgcagaaccagtggcagggcggcttctccgccaacgtcaccgtcaccaacctcggc
gaccccgtcgacgggtggtccctcgcctggaccgccgcctccggcgagaaggtcgaccag
gggtggaacgcggcgttctcctcctcgggcacgtcgatcaccgcgtccaacgtggactgg
aacagggccatccccaccggtggctcggtctcgttcgggttcaacggttcccggaccggc
gagccggtcgtcccgtcgagcttcgcgctcaacggcaccacgtgcaccggcggcgtcgcg
cccaccacgaccaccacccccggcggccccaccaccacgaccgggccgaccaccacgacc
accggcggcggcaccgcgccgctgcccgacccgaccgggcgcaagcaggtcgagcggctc
gaccgcggcctgatcagcgtccgctccggcagcggcaacctggtcagctggcggctcctg
ggcggcgacccgcagaacgtggcgttcaccgtctaccggggcggcgccaagctcaccgcc
tcgccgatcaccgggtccacgaactacctggacagcggcgcgccggccgacgcctcctac
acggtccgcgcggtggtcaacggcgtcgagcagcccgcgtccccggcctcgctggccttc
ggcaacggctaccgggacgtgccgatccagcccccgtccggctcctacgccgcgaacgac
gcgagcgtcggcgacctggacggcgacggggtctacgagttcgtcctcaagtgggagccc
aacaacgccaaggacaactcccagtccggcgtcaccgacgtggtctacgtcgacgcctac
aagctcaacggcgccaggctgtggcgcgtcaacctgggccgcaacatccgggcgggcgcg
cactacacccagttccaggtctacgactacgacggcgacggcaaggccgaggtggccatg
aagaccgccgacgccaccgtggacgggcgcggcacggtgatcggcaacgcctccgccgac
caccgcaactcctccggctacgtgctggcgggccccgagtacctgaccatgttcaacggc
cagaccggcgccgcgatgtccacggtcgactacgacccgccgcgcggcaccgtcgccgac
tggggcgataactacggcaaccgggtcgaccggttcctcgccgggaccgcctacctggac
ggcgcacgcccctcgctgatcatggctcgtgggtactacacccgcgcggtgatcgcggcc
tgggacttccgcaacggggcgctcaccaagcgctgggtcttcgactccaaggcctccggc
aacagcggctacgcggggcagggcaaccactcgctcaccatcggcgacgtcgacgcggac
ggccgggacgagatcgtctacggcgcggcggccgtcgacgacagcggcaagggcctgtgg
aacaccgggctcgggcacggggacgccgcgcacctgggcgacctcgacccgtcgcgggcg
ggcctggagtacttcaaggtcgacgaggacacctccaagcccggctcgttcttcgccgac
gcccgcaccggttcccgcgtgtggaccacggcgtccggcggcgacaacgggcgcggcgtc
gcgggcgacatctgggcgggcagccccggagccgaggcgtggtcggcgcgggacgcgaac
ctgcgcagcgccaagggcgcggagatcgggcgcaagcccggctccatcaacttcctggcc
tggtgggacggcgacccggtgcgggagctggtggaccagacccggatcgacaagtacggc
accggcggcgacacccgcctgctgaccgcctccgacgtgcacagcaacaacggcaccaag
gccaccccgtcgctgtccggcgacctgttcggcgactggcgcgaggaggtggtgtggccc
accacgaacaacaccgcgctgcggatccactccaccccgcaccagaccgaccggcgcatc
ccgaccctgatgcacgacaccatgtaccgggtcgcgatcgcctggcagaacacggcctac
aaccagccgccgcacccgagcttcttcatcggcgacggcatggccaccccgccctggccg
gacgtccactactga
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