Actinosynnema mirum: Amir_2281
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Entry
Amir_2281 CDS
T00957
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ami
Actinosynnema mirum
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ami03032
]
Amir_2281
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_2281
Enzymes [BR:
ami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Amir_2281
DNA replication proteins [BR:
ami03032
]
Prokaryotic type
DNA Topoisomerases
Amir_2281
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Amir_2281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
Hint_2
DNA_gyraseA_C
Intein_splicing
LAGLIDADG_3
Motif
Other DBs
NCBI-ProteinID:
ACU36221
UniProt:
C6WIH8
LinkDB
All DBs
Position
2535438..2538869
Genome browser
AA seq
1143 aa
AA seq
DB search
MARRKGPVTRVDPSAFDSAGAKVIDNSLTTEIEDSYLEYAYSVIHSRALPDARDGLKPVH
RRILFSMNEQNHRPTSPYVKSSRVVGDCFVRGALVSTPSGVRPIEEIVVGDHVLDPAGAP
VRVAQVYENPVSELVRVTFSDGRTILVTPGQRFRVHAAGDAGAAGVEWVAARDLVGRHAV
AFGPGRASALLGEGDQYAHVLGLLASAGVDGQRLRLTDEGPADAVHGWAIAANVAVTRDK
LPAEGPGGRDVHVLDLDGHVGVRAAVASGAAPAAVLLQRGRWAAFLAGVFDGAGSVRDGE
VVLGVRTALLAEQVGALLADCGLPATRADGEIRLSGGAAATLGAVLLPWARSDAEQDLRE
LTGASQAPAPEVVSVEPVAPDTTYDIQVDADEHAFVVDGLVVHNCMGKYHPHGDTAIYDA
MVRLAQDFSLNTPLIDGHGNFGSPDDGPAASRYTEARMSGAAMLLVGELDEDTVEFRPNY
DGSLTEPAVLPAAFPNLLVNGTSGIAVGMATNMIPHNLGEVVAAARHLVKHPDADLEKLM
EFIPGPDLPTGGMLLGLDEVRKAYETGRGVVRMRATVTTGPLEGSRGRQAITVTELPYGV
GPEKIIEKITDEVNKSKRLTGIADVKDLTDRENGIRLVIECKVGVNPQALLADLYRLTPL
EQSFGINNLVLVDGQPQTLGLKALLEVFLAHRYEVVTRRTRFRRRKREDRLHLVDGLLKA
LIDIDKVIKLIRRSENAQAAKEGLVSTFALSETQAAYILDTPLRRLTRFDSVELEGEQER
LRGEIAELSTILDDDKVLRRVVSNELGKVAKDLSAERRTTLLDGDLKEVLAASRTSGPLE
VADDPCQVVLSATGLVARTAAESEEAVEGRKRSGRAKHDAVAATVHTTARGQVLLVTSRG
RAFKTDVLPLPVLPQGEGTLSLSGGVPVRELVGLEAGERVVGIAPLGETDSPGLALGTKQ
GVVKVCAPEWPVRSDEFEVIGLKAGDEVVGAQWLADGQEALVFVSSEASLLRYAASLVRP
QGLRGGGMAGITLPGEASVVFFGAVRTDDAEHGEPVVVTSTGQSVKVTPFDLYPAKGRAT
GGVRAHRFLKGEDGLVLAWVGARPAAVTESGAAVELPEIDPRRDGSGAPHPGPDVIGHLV
ERA
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcaagggacccgtcaccagggtcgacccgtccgctttcgacagcgcgggc
gccaaggtgatcgacaactccctcaccaccgagatcgaggactcgtacctggagtacgcg
tactcggtcatccactcccgcgccctgccggacgcgcgagacggcctcaagccggtgcac
cgccggatcctgttctcgatgaacgagcagaaccaccggccgacctcgccgtacgtgaag
tcctcccgcgtggtcggtgactgcttcgtgcggggcgcgctcgtgtccaccccctcgggg
gtgcggccgatcgaggagatcgtggtcggcgaccacgtgctcgacccggcgggtgcgccc
gtccgggtggcgcaggtgtacgagaacccggtgtccgagctggtcagggtcacgttctcg
gacggccggaccatcctggtcacgccggggcagcggttccgggtccacgcggccggggac
gcgggcgcagcgggcgtcgagtgggtcgccgcgcgcgacctggtcggccgccacgcggtc
gccttcggccccggccgcgcgtccgcgctgctcggggagggcgaccagtacgcccacgtg
ctgggcctgctcgcctcggcgggcgtcgacggtcagcggctgcggctgaccgacgagggc
ccggcggacgccgtccacggctgggccatcgccgcgaacgtggccgtgaccagggacaag
ctgcccgccgaaggccctgggggccgcgacgtgcacgtgctcgacctggacggccacgtc
ggcgtgcgcgccgctgtcgcctccggggcagcgcccgccgccgtgctcctccagcgcggc
cggtgggcggcgttcctcgcgggcgtcttcgacggcgcgggctcggtgcgcgacggcgag
gtcgtcctcggcgtgcgcaccgcgctgctcgccgagcaggtcggcgcgctgctggccgac
tgcggactgcccgcgaccagggcggacggcgagatccggctgtccggcggggccgccgcc
acgctcggcgccgtcctgctgccgtgggcccgctcggacgccgagcaggacctgcgcgag
ctgaccggggcgtcgcaggccccggccccggaggtcgtgtcggtggagccggtcgccccg
gacaccacctacgacatccaggtcgacgccgacgagcacgcgttcgtcgtggacggcctc
gtcgtgcacaactgcatgggcaagtaccacccgcacggcgacaccgcgatctacgacgcg
atggtgcggctggcgcaggacttctcgctcaacaccccgctcatcgacggccacggcaac
ttcggctccccggacgacggaccggctgcctcgcgctacaccgaggcccgcatgtccggc
gcggcgatgctgctggtcggcgagctggacgaggacaccgtcgagttccgcccgaactac
gacggctccctcaccgagcccgccgtgctgcctgccgcgttcccgaacctgctggtcaac
ggcacctcgggcatcgcggtcggcatggcgacgaacatgatcccgcacaacctcggcgag
gtcgtggcggcggcgaggcacctggtcaagcacccggacgccgacctggaaaagctcatg
gagttcatccccggccccgacctgcccacgggcgggatgctgctgggcctggacgaggtg
cgcaaggcgtacgagaccgggcgcggcgtggtgcggatgcgcgccacggtcaccaccggg
ccgctggagggcagtcggggcaggcaggcgatcacggtcaccgagctgccgtacggcgtc
ggcccggagaagatcatcgagaagatcaccgacgaggtgaacaagtccaagcggctcacc
ggcatcgccgacgtcaaggacctcaccgaccgggagaacggcatccgcctggtcatcgag
tgcaaggtcggcgtcaacccgcaggcgctgctggcggacctgtaccggctcaccccgctg
gagcagtcgttcggcatcaacaacctggtgctggtcgacgggcagccccagacgctcggg
ctcaaggcgctgctggaggtgttcctggcccaccggtacgaggtggtcacccggcgcacc
aggttccgccgccgcaagcgcgaggaccggctgcacctggtcgacggcctgctcaaggcc
ctgatcgacatcgacaaggtgatcaagctgatccgccgcagcgagaacgcgcaggccgcg
aaggagggcctggtctccacgttcgcgctgtccgagacccaggccgcgtacatcctggac
acgccgctgcgccgcctcacccggttcgactcggtcgagctggagggcgagcaggagcgg
ctgcggggggagatcgccgagctgtccacgatcctcgacgacgacaaggtgctgcgccgg
gtcgtgtcgaacgagctgggcaaggtcgccaaggacctctccgccgagcgccgcaccacg
ctgctcgacggcgacctgaaggaggtgctggccgcctcgcgcacctccggtccgctggag
gtcgcggacgacccgtgccaggtcgtgctgtcggcgacgggcctggtggcgcgcaccgcc
gccgagtccgaggaggccgtggaggggcgcaagcgcagcggccgggccaagcacgacgcg
gtggcggcgaccgtgcacaccaccgcgcgcgggcaggtgctgctggtgaccagcaggggc
cgcgcgttcaagaccgacgtgctgccgctgccggtgctgccgcagggcgagggcacgctc
tcgctcagcggcggggtgccggtgcgcgagctggtgggcctggaggcgggggagcgggtg
gtcggcatcgccccgctgggcgagaccgactcgccggggctcgcgctcgggaccaagcag
ggcgtggtgaaggtgtgcgcgcccgagtggccggtgcggtcggacgagttcgaggtgatc
gggctcaaggccggtgacgaggtcgtgggcgcgcagtggctggccgacggccaggaggcg
ctggtgttcgtgtcctcggaggcgtcgctgctgcggtacgcggcgtcgctcgtgcgcccg
cagggcctgcgcggcggcggcatggcgggcatcacgctgccgggggaggcgtcggtggtg
ttcttcggcgcggtgcgcacggacgacgccgagcacggcgagccggtggtggtgacctcg
accgggcagagcgtgaaggtgacgccgttcgacctgtacccggcgaaggggcgggcgacc
ggcggtgtccgggcgcaccggttcctcaagggcgaggacgggctggtgctggcgtgggtc
ggcgcccggcccgccgcggtgaccgagtcgggggcggcggtggagctgccggagatcgac
ccgcgccgggacggctcgggcgcgccgcaccccggtccggacgtgatcgggcacctggtg
gaacgcgcctag
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