Actinosynnema mirum: Amir_2854
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Entry
Amir_2854 CDS
T00957
Name
(GenBank) putative spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ami
Actinosynnema mirum
Pathway
ami02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Amir_2854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ami02000
]
Amir_2854
Transporters [BR:
ami02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Amir_2854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ACU36783
UniProt:
C6WQC9
LinkDB
All DBs
Position
complement(3287324..3288427)
Genome browser
AA seq
367 aa
AA seq
DB search
MNNFSPSRRSFLRATAFAGLAAGLAACGTPGGSSSSSPSGATKLTMFHWAGAQGTVPKQV
GEAFAKASGVDLSYIEGTNADTFPKLVSSVQINPNSPLLNLGFFNPQSFAQGGAGDLWLP
VPDSVTNADKVNSAYKIADRRGAYLVMDAMGLVYNKNAFPDGPPKSWMELFNSAHRGKVT
TWDAPSFSVNALPVISKLNGGSETNFQPGIDVFGRAARDGQFRGFISSLDALRQQLNSGE
VVIAPGFQGVAEPWIKAGDPIGFAVPEEGVMAFPEGFQIVKGSTDAQVQAAARLMNDLFD
PAQVSAYCAATGTIPLVDGATLAPEYADRASFQLSTVEGAIKLDWNALVASLKDATTAWN
NDVKANI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttctccccgtcccggcggagcttcctccgcgcgacggccttcgcgggcctc
gcggcgggcctggccgcctgcggcacgccgggcggctcgtcctcgtcctcgccgtcgggg
gcgacgaagctgacgatgttccactgggccggtgcgcagggcacggtgcccaagcaggtc
ggcgaggcgttcgccaaggccagcggcgtcgacctgagctacatcgagggcaccaacgcc
gacaccttccccaagctggtgtcgtcggtgcagatcaacccgaacagcccgctgctgaac
ctcggcttcttcaacccgcagagcttcgcccagggcggcgccggtgacctgtggctgccc
gtgccggactcggtcaccaacgccgacaaggtcaacagcgcctacaagatcgccgatcgc
aggggcgcgtacctggtcatggacgcgatgggcctggtctacaacaagaacgccttcccg
gacggcccgcccaagagctggatggagctgttcaacagcgcccaccggggcaaggtgacc
acctgggacgcgccgtcgttcagcgtcaacgcgctcccggtgatctccaagctcaacggc
ggcagcgagacgaacttccagcccggcatcgacgtgttcggccgggccgcgcgcgacggc
cagttccgcggcttcatctcctcgctggacgcgctgcgccagcagctcaactcgggcgag
gtcgtgatcgcccccggcttccagggcgtggccgagccgtggatcaaggcgggcgacccc
atcgggttcgcggtgcccgaggagggcgtgatggcgttccccgagggcttccagatcgtc
aagggctcgaccgacgcgcaggtgcaggccgccgcgaggctgatgaacgacctgttcgac
ccggcgcaggtcagcgcgtactgcgccgccaccggcacgatcccgctggtggacggcgcg
accctggccccggagtacgccgaccgcgcgagcttccagctgtccaccgtggagggcgcg
atcaagctggactggaacgcgctggtcgccagtctcaaggacgccacgaccgcgtggaac
aacgacgtcaaggccaacatctga
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