Actinosynnema mirum: Amir_3002
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Entry
Amir_3002 CDS
T00957
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ami
Actinosynnema mirum
Pathway
ami03030
DNA replication
ami03430
Mismatch repair
ami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amir_3002
03430 Mismatch repair
Amir_3002
03440 Homologous recombination
Amir_3002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ami03032
]
Amir_3002
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_3002
Enzymes [BR:
ami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amir_3002
DNA replication proteins [BR:
ami03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Amir_3002
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Amir_3002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DnaX_C
Motif
Other DBs
NCBI-ProteinID:
ACU36922
UniProt:
C6WRT0
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All DBs
Position
3468612..3469730
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AA seq
372 aa
AA seq
DB search
MSEVYRDEVPAHLRTTAQLRSSGRRPVDPGKAAAWLERVFDGDVWRTALHDVTATTPLPS
SPPRAPEPARATTSPAREESATWARDVLADRDAVVLDTELTDFTGRVIEIAVVATDGATL
LTSLVDPEGAQINPYAQRAHGITAQMLTGAPTLEQLWPKLDHVLRGKRVIAWNAPFDLTR
LRAEHRHLFGDADLPDWLTGPWLCAMRKHAAWVGDRNTKGGGFRNHRLEGGHRAEGDCLA
ALAWIKRMADTAPGTEAHAGTGAHAGTGAHAVAGAHPGAVTTGAPEPDLATIRELWPQVL
GKVREHSRSLEAMLGKAEPAVVAGRVLTIRHPSAVVGRRVAQSQNLGLVNAALTALLGLP
WTTRVAPHDPGA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaggtctaccgggacgaggtcccggcgcacctgaggaccacggcgcaactgcgc
tcgtcgggaaggcgtccggtcgaccctggcaaggccgccgcctggctggagcgcgtcttc
gacggcgacgtctggcgcaccgccctgcacgacgtcaccgcgaccaccccgctcccgtcg
tcgcccccgcgcgcccccgaaccagcgcgcgccaccacctcacccgcgcgcgaggagtcc
gcgacgtgggcccgcgacgtcctcgccgaccgcgacgcggtcgtgctcgacaccgagctg
accgacttcaccgggcgcgtcatcgagatcgccgtggtggccaccgacggcgccaccctg
ctgacctcgctcgtcgacccggagggcgcgcagatcaacccgtacgcgcagcgcgcgcac
ggcatcaccgcccagatgctcaccggcgcgcccacgctggagcagctgtggccgaagctc
gaccacgtcctgcgcggcaagcgcgtgatcgcctggaacgccccgttcgacctcaccagg
ctgcgcgccgagcaccggcacctcttcggggacgccgacctcccggactggctgaccggc
ccgtggctgtgcgcgatgcgcaagcacgcggcctgggtgggcgaccgcaacaccaagggg
ggcggcttccgcaaccaccgcctggagggcggccaccgcgcggagggcgactgcctcgcc
gccctggcctggatcaagcgcatggcggacaccgcgcccggcacggaagcgcacgctggc
acgggagcgcacgctggcacgggagcgcacgccgtcgcgggagcgcaccccggcgcggtc
acgaccggcgcaccggagcccgacctggcgacgatccgcgagctgtggccccaggtcctg
ggcaaggtccgggagcacagccggtccctggaggccatgctgggcaaggcggagcccgcc
gtcgtggcgggccgcgtcctgacgatccgccacccctccgcggtggtcggccgcagggtc
gcgcagagccagaacctcggcctggtcaacgccgccctgaccgcgctcctcggcctgccg
tggaccacgcgggtcgcaccgcacgaccccggcgcctga
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