Actinosynnema mirum: Amir_3979
Help
Entry
Amir_3979 CDS
T00957
Name
(GenBank) transcriptional regulator, TetR family
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
ami
Actinosynnema mirum
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ami03000
]
Amir_3979
Transcription factors [BR:
ami03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Amir_3979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_31
TetR_C_6
TetR_C_28
Motif
Other DBs
NCBI-ProteinID:
ACU37844
UniProt:
C6WFQ8
LinkDB
All DBs
Position
4662650..4663261
Genome browser
AA seq
203 aa
AA seq
DB search
MDEDDAGTGARTPARGAGSRRPDPGRRDRIIDACLDVIAEVGVDGASHRGIAAAAGVPLG
SMTYHFDGMRQLLREAFGRFAGAVAAGFEARMAAAANAEEAAAAVVEIITVDTLSTQRDL
VLTHELYTLAARDPECRDVTNAWMAASRRALERHFDPLTARLLDALIEGMSIHRALDTEP
HDRAAAVAAVERITGRTSGGTAG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaggacgacgcggggaccggtgcccggacacccgcgcggggggcgggttcgcgc
aggcccgaccccggcaggcgggaccggatcatcgacgcctgcctggacgtgatcgccgag
gtcggggtggacggggcctcgcaccggggcatcgccgccgcggccggggtgccgctgggg
tcgatgacctaccacttcgacgggatgcggcagctgctgcgcgaggcgttcggccggttc
gcgggggccgtggccgccgggttcgaggcgcgcatggccgccgccgcgaacgccgaggag
gcggcggcggcggtcgtggagatcatcaccgtggacaccctgagcacccagcgggacctg
gtgctcacgcacgagctgtacaccctggccgcgcgcgacccggagtgccgggacgtcacc
aacgcgtggatggccgcgagcaggcgcgcgctggagcggcacttcgacccgctcacggcc
aggctgctcgacgccctgatcgagggaatgtcgatccaccgcgcgctggacaccgagccg
cacgaccgggccgccgccgtggccgccgtcgagcggatcaccgggcggaccagcggagga
accgccgggtag
DBGET
integrated database retrieval system
