Actinosynnema mirum: Amir_4196
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Entry
Amir_4196 CDS
T00957
Name
(GenBank) conserved repeat domain protein
Organism
ami
Actinosynnema mirum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
CarboxypepD_reg
SpaA
DUF11
bMG3
Trs65
Motif
Other DBs
NCBI-ProteinID:
ACU38051
UniProt:
C6WHD2
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All DBs
Position
complement(4945227..4947227)
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AA seq
666 aa
AA seq
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MPAARGAHRFAVVAAIALLVLGVLWWDVPGVLRAVGTGSITGQAYVDANDDGVRQGGEAA
LPDLPVRLTGTRDSCPVGEQPACAASATTTTSAAGEFTFTGLEAGLYSVTAARPAGYADG
KSTAGAAGGSLSAPNQISGIRVDSGASATGYSFGMRVGAVTGTAWVDNNANGTIEDDEHE
WLEDVTVTLVKSDETPVATTTTSTTGNYSFDAVLPGDYVVRATLPAGYGAASPTSVPFTL
ASGQGRHVDFSMVKGALGNFVWLDADRDGLQGIGEDGVPGIAVELHRTPGGVVDSQLTDA
NGEYYFVGLDVGTYFIRVIKPSGTVFTERDKSATVGSHVDADGYSSPVEIKVENSGITQD
MTLDAGFYELAQGETPPTTTTTTTTTTTTAPTTTTTTTPTTTTTPTTTTTGPTTTTTGST
TTTTGPTTTTGPTTTTGATTSTTPPTTTAPGTTTTTTTPPPRTDLGVQFAVDNPKPAVGD
KVTFTTVVVNRGTAPVEGSRVTITLPDGLRPETGTGQNLRRALLAQSGWTCQATGQQLVC
ANPATVQPGASFEPLTVVTTATAPVLPQATTVAVALYDGTPDDNPDNDGTTPALAIPSTT
TPTPGVVTELLLPTQQPTTTPLATTGRPAHALLLTALVLMVLGAGLLVTTRKPATGGRHR
AARRSD
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgcacggggcgcgcaccgcttcgcggtggtcgcggcgatcgcgctgctggtc
ctcggcgtcctgtggtgggacgtgccgggagtgctgcgcgcggtcggcaccggatcgatc
accggacaggcgtacgtggacgcgaacgacgacggcgtccggcagggcggtgaggccgcg
ctgcccgacctgcccgtccggctcaccggcacgcgcgacagctgcccggtgggcgagcag
cccgcctgcgcggcgtccgcgaccacgaccacgtccgcggccggcgagttcaccttcacc
ggcctggaggcgggcctgtactcggtcaccgccgcccggcccgccgggtacgccgacggc
aagtccacggcgggcgcggcgggcggctcgctgagcgccccgaaccagatcagcggcatc
cgggtcgacagcggcgcgtccgccaccgggtactcgttcggcatgagggtcggggccgtc
accggcaccgcgtgggtcgacaacaacgccaacggcacgatcgaggacgacgagcacgag
tggctggaggacgtgaccgtcacgctcgtgaagtccgacgagaccccggtcgcgaccacg
accacctccaccaccggcaactacagcttcgacgccgtcctgccgggcgactacgtcgtc
cgggcgaccctgcccgccgggtacggcgcggcctcacccacctcggtgccgttcacgctg
gcgtccgggcagggcaggcacgtggacttctcgatggtcaagggcgcgctgggcaacttc
gtgtggctcgacgccgaccgcgacgggctccaggggatcggcgaggacggggtgcccggc
atcgccgtcgagctgcaccgcacgccgggcggggtggtcgacagccagctcaccgacgcc
aacggcgagtactacttcgtggggctggacgtgggcacgtacttcatccgagtgatcaag
ccaagcgggacggtgttcaccgagcgcgacaagtccgccacggtcgggtcgcacgtcgac
gcggacgggtactcatcaccggtcgagatcaaggtcgagaacagcgggatcacccaggac
atgaccctggacgcgggcttctacgagctcgcgcagggcgagaccccgccgaccacgacg
accaccaccaccaccaccaccaccaccgctccgacgaccacaaccacgacgacaccgacc
accaccaccacgccgacgacgaccaccacgggcccgacgaccacgaccacgggttcgacg
accacgaccacgggcccgacgaccacgaccggtccgaccaccacgacgggcgcgaccacc
tccaccacgccgcccaccacaaccgcccccggcacgaccacgaccaccaccacgcccccg
ccgcgcaccgacctgggtgtgcagttcgccgtggacaacccgaagcccgccgtgggcgac
aaggtcacgttcaccaccgtggtcgtcaaccggggcaccgcgccggtggagggctcacgg
gtgacgatcaccctgccggacggcctgcgtcccgagaccggcaccggccagaacctccgc
agggcgctcctggcccagtccggctggacctgccaggcgaccggccagcagctggtctgc
gcgaacccggccaccgtccaaccgggcgcctcgttcgagccgctgaccgtggtgacgacc
gcgacggccccggtcctgccgcaggcgaccacggtcgcggtcgccctgtacgacggcact
cccgacgacaacccggacaacgacggcacgaccccggccctcgccatcccgagcacgacc
accccgaccccgggcgtggtgaccgagctgctcctcccgacccagcagcccaccacaacc
cccctggccaccacgggccgcccggcgcacgcgctcctgctgacggccctggtcctgatg
gtcctgggcgcgggcctgctggtcaccacccgcaagcccgccaccggaggccgccaccgc
gcggcacgccggagcgactga
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