Actinosynnema mirum: Amir_4468
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Entry
Amir_4468 CDS
T00957
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ami
Actinosynnema mirum
Pathway
ami00061
Fatty acid biosynthesis
ami00071
Fatty acid degradation
ami01100
Metabolic pathways
ami01212
Fatty acid metabolism
ami02024
Quorum sensing
ami04146
Peroxisome
Module
ami_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Amir_4468
00071 Fatty acid degradation
Amir_4468
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Amir_4468
09145 Cellular community - prokaryotes
02024 Quorum sensing
Amir_4468
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ami01004
]
Amir_4468
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ami04147
]
Amir_4468
Enzymes [BR:
ami01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Amir_4468
Lipid biosynthesis proteins [BR:
ami01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Amir_4468
Exosome [BR:
ami04147
]
Exosomal proteins
Exosomal proteins of breast milk
Amir_4468
Exosomal proteins of breast cancer cells
Amir_4468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
ExoU_mid_dom
Motif
Other DBs
NCBI-ProteinID:
ACU38314
UniProt:
C6WKA1
LinkDB
All DBs
Position
complement(5293797..5295590)
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AA seq
597 aa
AA seq
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MREKSIPPLYEVPAEDNLLGPVIRNTAEQPERVLLARQVDGAWRDVTAARFLAEVRSAAK
GLIAAGVGPRDKVAIMSRTRYEWTVLDYAVWGAGAVSVPLYETSSAEQVEWILTDSGAVA
IVVETEAHRSLVAKVRPGLPALKQVWTINDGALDQLDAGGASVGDELLDERIAGLGADEL
ATIVYTSGTTGRPKGCVITHRNLLAECGNTIARLQPLFHDNASSLLFLPLAHVLGRVVQL
CSLAAPVKLGHVSDLKDLPAALAAFQPTFLPAVPRVFEKVYNSARAQAVAGGKQKVFDLA
VDTSIAYSRALETPSGPGLALKLKHKLFDRLVYGKLRAVLGGRAAYALSGGAPLGERLGH
FYRGLGFLVLEGYGLAESSAATTTNPPDVQKIGTVGLPLPGSSVRIADDGEVQLKGEHIF
TGYWNNPGATAAVLDADGWFSTGDLGSLDEEGYLRITGRKKEIIVTSGGKNVAPAVIEDR
IRAHALVAECMVVGDAKPFIAALITLDEEMLPRWAAQNGKGALTPQQLREDADLLAEVQL
AVDLGNSAVSRAEAVREFRVLDGQFTEASGHLTPSLKLKRNVVRADFDAQIREIYAE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgaaaagagcattccgccgctctacgaggtacccgccgaggacaacctgctgggt
cccgtcatccgcaacaccgccgagcagcccgagcgcgtcctcctcgcccgccaggtcgac
ggcgcgtggcgggacgtcaccgcggcccggttcctcgccgaggtgcgctccgccgccaag
gggctgatcgccgcgggcgtcgggccgcgcgacaaggtcgcgatcatgtcgcgcacccgc
tacgagtggaccgtcctggactacgccgtctggggcgcgggcgcggtgtccgtgcccctc
tacgagacctcgtcggccgagcaggtcgagtggatcctcacggactccggcgcggtcgcg
atcgtcgtggagaccgaggcgcaccgctcgctggtggccaaggtccggccgggcttaccc
gcgctcaagcaggtctggaccatcaacgacggcgcgctcgaccagctcgacgcgggcggc
gcgtccgtgggcgacgagctgctcgacgagcggatcgcgggtctcggcgcggacgagctg
gccacgatcgtctacacctccggcaccaccggccgccccaagggctgcgtgatcacccac
cggaacctgttggcggagtgcgggaacaccatcgcccggttgcagccgctgttccacgac
aacgcctcctcgctgctgttcctgccgctggcccacgtgctgggccgcgtcgtccagctc
tgctcgctcgccgcgccggtcaagctcggccacgtcagcgacctcaaggacctgcccgcc
gcgctggccgcgttccagcccaccttcctgcccgccgtgccgcgcgtgttcgagaaggtc
tacaactcggcgcgcgcccaggccgtcgcgggcggcaagcagaaggtgttcgacctggcg
gtggacacgtccatcgcgtacagcagggcgctggagaccccgtccgggccgggattggcg
ttgaagctcaagcacaagctgttcgaccggctcgtgtacggcaagctccgcgcggtcctc
ggcggccgggccgcctacgccctgtccggcggcgccccactcggcgagcgcctcggccac
ttctaccggggcctgggcttcctggtgctggagggctacggcctggccgagtccagcgcc
gccaccacgacgaacccgccggacgtgcagaagatcggcacggtcggcctgccgctgccg
ggctcgtcggtgcgcatcgccgacgacggcgaggtccagctcaagggcgagcacatcttc
accggctactggaacaacccgggggccaccgccgccgtgctggacgcggacggctggttc
agcaccggcgacctcggctccctggacgaggagggctacctcaggatcaccggccgcaag
aaggagatcatcgtgacgtcgggcggcaagaacgtcgccccggccgtcatcgaggaccgc
atccgcgcgcacgcgctcgtggcggagtgcatggtcgtcggcgacgcgaagccgttcatc
gccgccctgatcaccctggacgaggagatgctgccccgctgggcggcgcagaacggcaag
ggagccttgacgccgcaacaactccgcgaggacgcggacctgctggcggaggtgcagctc
gcggtggacctcggcaactcggcggtgtcgcgcgccgaggcggtccgcgagttccgcgtc
ctggacggccagttcaccgaggcgtcgggacacctgacgccgtcgctgaagctgaagcgg
aacgtggtgcgcgcggacttcgacgcgcagatccgggagatctacgcggagtga
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