Actinosynnema mirum: Amir_5018
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Entry
Amir_5018 CDS
T00957
Name
(GenBank) Polyprenyl synthetase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ami
Actinosynnema mirum
Pathway
ami00900
Terpenoid backbone biosynthesis
ami00997
Biosynthesis of various other secondary metabolites
ami01100
Metabolic pathways
ami01110
Biosynthesis of secondary metabolites
Module
ami_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Amir_5018
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
Amir_5018
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ami01006
]
Amir_5018
Enzymes [BR:
ami01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Amir_5018
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Amir_5018
2.5.1.29 geranylgeranyl diphosphate synthase
Amir_5018
Prenyltransferases [BR:
ami01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Amir_5018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF3326
Motif
Other DBs
NCBI-ProteinID:
ACU38841
UniProt:
C6WS21
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All DBs
Position
5978465..5979505
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AA seq
346 aa
AA seq
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MTDLDVSPAQRSARDVLAWGRALVDPALRAAVDRLPESMRSIAGYHFGWWDEHGVPTGAD
AGKAIRPVLVLLAARAVGGRAEDALPAAVAVELVHNFSLLHDDVMDGDATRRHRPTAWAV
FGVNAAVLAGDALMTLALDVLAGSGHPAAARGIVLLSAAVQELLDGQSSDLGFEERDEVG
VAECVRMAEGKTAALLGACCSLGALFGGGSADQVGELGLFGERTGLAFQFVDDLLGIWGD
PAATGKPVHSDLRNRKKSLPVVAALASRSQAGRELAGLYRGRGELAGSALEEAAGLVEQA
GARAWGQRRADELLAQARTHLRAAGVDPVAARELDAVAVLMTRRDR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctcgacgtctcccccgcgcagcgctccgcgcgggacgtgctggcctggggc
cgggcgctggtggacccggcgctgcgcgccgccgtcgaccggctgcccgagtcgatgcgc
tccatcgcgggctaccacttcggctggtgggacgagcacggcgtccccaccggcgcggac
gcgggcaaggcgatccggccggtgctcgtgctgctggccgcgcgcgcggtcggcgggcgg
gccgaggacgcgctgcccgccgcggtcgcggtggagctggtgcacaacttctcgctgctg
cacgacgacgtgatggacggcgacgccacccgcaggcaccggccgaccgcgtgggcggtg
ttcggggtcaacgcggcggtgctcgcgggcgacgcgctgatgacgctggcgctggacgtg
ctggccgggagcgggcacccggcggcggcgcggggcatcgtgctgctgagcgcggccgtg
caggagctgctcgacgggcagagctcggacctcgggttcgaggagcgcgacgaggtcggc
gtcgccgagtgcgtgcgcatggccgagggcaagactgcggcgctgctgggcgcgtgctgc
tcgctgggcgccctgttcggcggcggctccgccgaccaggtgggcgagctggggctgttc
ggcgagcggacgggcctggcgttccagttcgtggacgacctgctgggcatctggggcgac
ccggccgccaccggcaagccggtgcactcggacctgcgcaaccgcaagaagtcgctgccc
gtggtggccgcgctggcctcgcgcagccaggccgggcgcgagctggccgggctgtaccgg
gggcgcggcgagctggccgggtcggcgctggaggaggcggccgggctggtcgagcaggcc
ggggcgcgggcgtggggccagcggcgggccgacgagctgctcgcgcaggccaggacgcac
ctgcgggcggcgggcgtcgacccggtcgcggcgcgcgagctggacgccgtcgccgtgctg
atgacccgacgcgaccgctga
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