KEGG   Actinosynnema mirum: Amir_5399
Entry
Amir_5399         CDS       T00957                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
  KO
K03090  RNA polymerase sigma-B factor
Organism
ami  Actinosynnema mirum
Brite
KEGG Orthology (KO) [BR:ami00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ami03021]
    Amir_5399
Transcription machinery [BR:ami03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Amir_5399
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 Sigma70_ECF HTH_Crp_2 HTH_3 HTH_24 Peptidase_inhib_put MarR DUF7343 LacI HTH_AraC
Other DBs
NCBI-ProteinID: ACU39218
UniProt: C6WA29
LinkDB
Position
6414838..6415569
AA seq 243 aa
MSAVMDFQPLFRELAEAQSRVERRQELRDQLVTEYLPVAWHIADRFAERGESVEDLRQVA
AVGLIHAVDRFDVQRGIDFLAFAVPTITGEVRRHLRDQGWAVRVPRRLKELCLAIDAARV
ELARASGRTPTPSEVARHLNLSLAEVYEGLHATSANHMVSLDEVDSDHRLGVDDPALEVV
ELQHALDPMLRGLPKRERRIVLLRFFRNMTQSQIADSVGVSQMHVSRLLSRSLARLRDLL
DER
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagtgcggtaatggacttccaaccgttgttccgcgagttggccgaggcgcagtcgcgc
gtcgaacgccgccaggagctgcgggaccagctggtgacggagtacctgccggtcgcctgg
cacatcgccgaccggttcgccgagcgcggcgagtcggtggaggacctgcggcaggtggcc
gccgtgggcctgatccacgcggtggaccggttcgacgtgcagcgcggcatcgacttcctc
gcgttcgccgtcccgaccatcaccggcgaggtgcgccgccacctgcgcgaccaggggtgg
gcggtgcgggtgccgcgcaggctcaaggagctgtgcctggccatcgacgccgcccgcgtc
gagctggcccgcgcgagcggtcgcacgccgacgccgagcgaggtcgccaggcacctgaac
ctctcgctcgccgaggtctacgaggggctgcacgccacctccgccaaccacatggtctcc
ctggacgaggtggactccgaccaccgcctgggcgtcgacgatccggctctggaggtggtc
gagctccagcacgcgcttgatccgatgcttcgcgggctacccaagagggagcggaggatc
gtgctgctgcggttcttcaggaacatgacgcagagccagatcgccgactcggtgggcgtg
tcgcagatgcacgtgtcgcgcctgctgagccggtcgctcgcccgcctgcgggacctgctc
gacgaacgctga

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