Actinosynnema mirum: Amir_5823
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Entry
Amir_5823 CDS
T00957
Name
(GenBank) guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ami
Actinosynnema mirum
Pathway
ami03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Amir_5823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ami03019
]
Amir_5823
03016 Transfer RNA biogenesis [BR:
ami03016
]
Amir_5823
Enzymes [BR:
ami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Amir_5823
Messenger RNA biogenesis [BR:
ami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Amir_5823
Transfer RNA biogenesis [BR:
ami03016
]
Prokaryotic type
tRNA degradation factors
Amir_5823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KhpA-B_KH
DUF1773
PKD_3
Motif
Other DBs
NCBI-ProteinID:
ACU39634
UniProt:
C6WDJ7
LinkDB
All DBs
Position
complement(6859588..6861831)
Genome browser
AA seq
747 aa
AA seq
DB search
MTDIEVHETSAVIDNGRFGTRTIRFETGHLARQAAGSVVAYLDDETMLLSATTASKAPKE
HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ
VVITVMSLNPADLYDVVAINAASASTQLAGLPFSGPIGGVRVALIEGQWVAFPTHEQLEN
AVFDMVVAGRVVGDDVAIMMVEAEATEKVIDLIGEGAQAPTEEVVAAGLEASKPFIKVLC
EAQAQLAQVAAKATGEFPTFPAYQADAFEAVEAAGASDLAQALTIAGKQEREGRIDEVKA
SVLEKLAAQFEGREKEVGAAFRSLTKKLVRQRILRDKVRIDGRGLTDIRSLGAEVAIIPR
THGSALFERGETQILGVTTLNMLRMEQQIDSLSPETHKRYLHHYNFPPYSTGETGRVGSP
KRREIGHGALAERALMPVLPKRDEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVSGIAMGLVSDEVDGKTEYVALTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPSEVLASALSQARDARLAILEVMAEAIDVPDEMSPFAPRVTSVKIPTDKIGEVIGPKG
KMINSITEQTGADISIEDDGTIYVGAADGPSAEAAIGLINAIANPQLPKVGERFLGTVVK
TAAFGAFVSLLPGKDGLIHISKLGNGKRIGKVEDVVKVGDKLRVEIADIDQRGKISLVLV
SEEEGADKAAAPAAETAETSAPESSDQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgacggacatcgaggtccacgagacttcagccgtgatcgacaacggtcggttcggcacc
cgcaccatccggttcgagaccggtcacctggcccgccaggccgcaggcagcgtcgtcgcg
tacctggacgacgagaccatgctgctctcggcgaccaccgcctccaaggcgccgaaggag
cacttcgacttcttcccgctgacggtggacgtcgaggagcgcatgtacgccgcgggtcgc
atccccggctcgttcttccgccgcgagggccgtccgtccacggacgcgatcctgacctgc
cgcctgatcgaccgcccgctgcgcccgtccttcgtggacggcctgcgcaacgagatccag
gtcgtcatcacggtcatgagcctgaacccggccgacctgtacgacgtcgtggcgatcaac
gccgcgtccgcgtcgacgcagctcgccggcctgcccttctccggccccatcggcggcgtc
cgcgtggcgctgatcgagggccagtgggtcgcgttcccgacccacgagcagctggagaac
gccgtcttcgacatggtcgtcgccggccgcgtcgtgggcgacgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaaggtcatcgacctgatcggcgagggcgcccaggccccg
accgaggaggtcgtggccgccggtctcgaggcctccaagccgttcatcaaggtgctgtgc
gaggcgcaggcccagctcgcgcaggtcgccgccaaggcgaccggcgagttcccgaccttc
ccggcctaccaggctgacgcgttcgaggccgtcgaggccgcgggcgcgagcgacctggcc
caggcgctgaccatcgcgggcaagcaggagcgcgagggtcgcatcgacgaggtcaaggcg
tcggtgctggagaagctggccgcgcagttcgagggccgcgagaaggaggtcggcgccgcg
ttccgctcgctgaccaagaagctcgtgcgccagcgcatcctgcgcgacaaggtccgcatc
gacggccgcggcctgaccgacatccggtcgctcggcgccgaggtcgcgatcatccccagg
acgcacggctccgccctgttcgagcgcggcgagacccagatcctgggcgtcaccacgctg
aacatgctccgcatggagcagcagatcgactcgctctccccggagacgcacaagcggtac
ctgcaccactacaacttcccgccctactccaccggtgagaccggtcgggtcggctcgccc
aagcgccgcgagatcggccacggcgcgctggcggagcgggcgctgatgccggtgctgccc
aagcgcgacgagttcccgtacgcgatccgccaggtctccgaggcgctggggtccaacggc
tccacgtccatgggctcggtctgcgcgtccacgatgtcgctgctcaacgcgggcgtcccg
ctgaaggcgccggtgtcgggcatcgccatgggcctggtctccgacgaggtcgacggcaag
accgagtacgtcgcgctgaccgacatcctcggcgccgaggacgcgttcggcgacatggac
ttcaaggtcgcgggcaccaagcagttcgtgaccgcgctccagctcgacaccaagctcgac
ggcatcccgtccgaggtcctggcgtcggcgctgtcccaggcccgcgacgcgcgcctggcg
atcctggaggtcatggccgaggccatcgacgtcccggacgagatgagcccgttcgcgccg
cgcgtcacgtcggtcaagatcccgaccgacaagatcggcgaggtcatcgggcccaagggc
aagatgatcaactcgatcaccgagcagaccggcgccgacatctccatcgaggacgacggc
acgatctacgtcggtgcggcggacggcccgtccgcggaggccgccatcggcctgatcaac
gccatcgcgaacccgcagctgccgaaggtcggcgagcgcttcctgggcaccgtggtcaag
accgcggcgttcggcgcgttcgtctccctgctgccgggcaaggacggcctgatccacatc
tccaagctgggcaacggcaagcgcatcggcaaggtcgaggacgtcgtcaaggtcggcgac
aagctccgcgtcgagatcgcggacatcgaccagcgcggcaagatcagcctggtgctggtg
tccgaggaggagggggccgacaaggccgccgccccggccgccgagaccgctgagacctcg
gctccggagtcctcggaccagtga
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