Actinosynnema mirum: Amir_5828
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Entry
Amir_5828 CDS
T00957
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ami
Actinosynnema mirum
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ami03016
]
Amir_5828
Enzymes [BR:
ami01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Amir_5828
Transfer RNA biogenesis [BR:
ami03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Amir_5828
Prokaryotic type
Amir_5828
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ACU39639
UniProt:
C6WDK2
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All DBs
Position
complement(6865056..6865955)
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AA seq
299 aa
AA seq
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MPASPRPAVPPGLVVVDKPDGMTSHDVVAKVRRILGTRKVGHAGTLDPMATGVLVLGVER
ATKLLGHLALDSKAYLSTIRLGASTTTDDAEGEVLSSADSTAVPEDAIRAGVAKLTGAIQ
QVPSAVSAVKVDGKRAYARVRAGEEVELPPRPVTVHRFDVLSIRREADATELDVMVECSS
GTYVRALARDLGVDLGVGGHLAALRRTRVGPFDLRVAKTLEQLADEPGLSLDLDAAVSAA
FPRREITPSEVVALSHGQRLRAGGVEGTYGVFGPDGHAVALAKDEGPLAKPVVVLTPAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcatctccccgccccgctgttccgcccggtctcgtcgtcgtggacaagcccgac
ggcatgacctcccacgacgtggtcgccaaggtgcgccgcatcctcggcacccgcaaggtc
ggccacgcgggcacgctcgacccgatggccaccggcgtgctcgtcctcggcgtcgagcgc
gccaccaagctgctcggccacctcgcgctcgacagcaaggcctacctgtccacgatccgc
ctcggcgcctccaccaccaccgacgacgccgagggcgaggtgctgtcctcggcggactcc
accgccgtgcccgaggacgcgatccgcgcgggcgtcgccaagctcaccggcgccatccag
caggtgccgagcgcggtcagcgccgtgaaggtcgacggcaagcgcgcctacgcccgcgtc
cgcgcgggcgaggaggtcgagctgccgccgcgaccggtcaccgtgcaccggttcgacgtg
ctgtcgatccgccgcgaggccgacgcgaccgagctggacgtgatggtcgagtgctcctcc
ggcacgtacgtgcgcgcgctggcccgcgacctcggcgtcgacctgggcgtcggcggccac
ctggcggcgctgcgccgcaccagggtcggcccgttcgacctgcgggtggccaagaccctg
gagcagctcgccgacgagcccggcctctccctggacctggacgccgcggtgtcggcggcg
ttcccgcgccgcgagatcacgcccagcgaggtcgtcgccctgtcccacggccagcgcctg
cgcgcgggcggggtggagggcacctacggcgtgttcggccccgacggccacgcggtggcc
ctggcgaaggacgagggcccgctggcgaagccggtcgtcgtcctgacccccgcgggctga
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