Actinosynnema mirum: Amir_5852
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Entry
Amir_5852 CDS
T00957
Name
(GenBank) protein of unknown function RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
ami
Actinosynnema mirum
Pathway
ami03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Amir_5852
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ami01001
]
Amir_5852
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ami03009
]
Amir_5852
Enzymes [BR:
ami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
Amir_5852
Protein kinases [BR:
ami01001
]
Serine/threonine kinases: Other
RIO family [OT]
Amir_5852
Ribosome biogenesis [BR:
ami03009
]
Eukaryotic type
Pre-40S particles
Kinases
Amir_5852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Kdo
Motif
Other DBs
NCBI-ProteinID:
ACU39662
UniProt:
C6WDM5
LinkDB
All DBs
Position
6888887..6890050
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AA seq
387 aa
AA seq
DB search
MREHAITTNALHELKINFNHGGRVDDAACADTRYGGTDDVDTDDTDTDADDYAGHADADG
YDADGHDEGDGDDSDADPYGRWSDYELDDYGPREVRTRVRVVRDDEENVRRGRLTQEAKK
RLGESRQLTGPEDGDRWSTWGSADQGPAPHPAWLVTDLGAVDRELGLIKSGKEADVSLLE
RATPERSCLLAAKRYRDNDHRLFHRDAGYLEGRRERRSREARAMSRRSAFGRNLIAERWA
VAEFAALGALWQRGVPVPYPVQRDGTEVLMEFIGDGAQAAPRLAQTRPEPDALVDLWRQL
GSALTGMAAAGYAHGDLSPYNLVVHDDRLVVIDLPQLVDLVANPRGAEFLARDVRVVADW
FTARGLPAELADPAELTADLLREAGLG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagcacgcgatcaccacgaacgcactgcacgaactcaagatcaacttcaatcac
ggcggtcgggtcgacgacgccgcctgtgccgatacccgctacggcggtaccgatgatgtc
gacaccgacgacaccgacaccgatgccgacgactacgcaggtcacgccgatgccgacggc
tacgacgccgacggtcacgacgagggtgacggcgacgacagcgacgccgacccgtacggc
cgctggtccgactacgagctggacgactacggcccccgcgaggtcaggactcgggtccgg
gtcgtgcgggacgacgaggagaacgtccggcgcggcaggctcacccaggaggccaagaag
cggctcggcgagtcgcggcagctcaccggacccgaggacggcgaccggtggtccacctgg
ggcagcgccgaccaggggcccgcgccgcacccggcgtggctggtcaccgacctcggggcg
gtcgaccgggagctcgggctgatcaagtccggcaaggaggcggacgtctcgctgctggag
cgcgccacgcccgagcggtcctgcctgctggccgcgaagcggtaccgggacaacgaccac
cggctgttccaccgggacgcgggttacctggagggccgtcgggagcggcggagccgggag
gcccgcgcgatgtcccggcgcagcgcgttcgggcggaacctgatcgccgagcggtgggcg
gtggccgagttcgcggcgctcggcgcgctgtggcagcgcggcgtgccggtgccctacccg
gtgcagcgcgacggcaccgaggtgctgatggagttcatcggcgacggcgcccaggccgcg
ccccggctcgcccagaccaggcccgagccggacgcgctggtggacctgtggcggcagctc
gggtcggcgctgacggggatggccgccgccgggtacgcgcacggcgacctgtcgccgtac
aacctggtggtgcacgacgaccggctcgtggtgatcgacctgccgcagctggtcgacctg
gtcgccaacccgcgcggggccgagttcctggcgcgcgacgtgcgggtggtggccgactgg
ttcaccgcgcgcggcctgcccgccgagctggccgacccggccgagctgaccgccgacctc
ctccgggaggccggactggggtga
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