Actinosynnema mirum: Amir_5913
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Entry
Amir_5913 CDS
T00957
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
ami
Actinosynnema mirum
Pathway
ami02020
Two-component system
ami02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Amir_5913
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Amir_5913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ami03021
]
Amir_5913
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ami02035
]
Amir_5913
Transcription machinery [BR:
ami03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Amir_5913
Bacterial motility proteins [BR:
ami02035
]
Flagellar system
Flagellar assembly proteins
Stator
Amir_5913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ACU39722
UniProt:
C6WEU7
LinkDB
All DBs
Position
complement(6956439..6957257)
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AA seq
272 aa
AA seq
DB search
MGRPAHAAAESRTADDVEAGIIALWHTYGQSREQGLRDRLVLHYAPLVKYVAGRVGTGLP
AHVDVADLIQSGIFGLVDAIEKFEPERGLKFETYAMQRIRGAILDDLRSQDWVPRSVRSR
ARDVERALERLGGRLQRTPTDRELAAELKIGLGELRELYAQFQLTSVVALDELIAAGRAA
GSAGSSLAESLPDEGAEDPVASLVDQDSRRQLADAIAQLAERDRVVVTLYYFENLTLAEI
GKVLGVTESRVCQLHTRAVLRLRTKINEQLET
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtggggcggcctgctcatgccgctgccgagtcccggaccgctgatgacgtcgaagccggg
atcatcgcgctgtggcacacctacgggcagtcgcgcgagcaggggctgcgggatcggttg
gtgctgcactacgcgccgctggtcaagtacgtcgccgggcgggtcgggaccgggttgccc
gcgcacgtcgacgtcgccgacctgatccagtccgggatcttcgggctggtcgacgccata
gagaagttcgagcccgagcgcggcctgaagttcgagacctacgccatgcagcgcatccgt
ggcgcgatcctggacgacctcagatcgcaggactgggttccccgttccgttcgcagcagg
gctcgggacgtcgagcgggcgctcgagcggctcggtgggcggttgcagcggacgcccacc
gaccgggagctggccgctgagctgaagatcgggctcggggagctgcgggagctgtacgcg
cagttccagctcaccagcgtcgtcgcgctggacgagctgatcgccgcaggccgggccgcc
gggagcgcggggtcctcgctggcggagtcgttgcccgacgaaggcgccgaggacccggtc
gcctcgctggtcgaccaggacagccgtcggcagctcgccgacgccatcgcgcagctggcc
gagcgggaccgggtcgtggtcacgctgtactacttcgagaacctgacgctggccgagatc
ggcaaggtcctcggggtcaccgagtcccgtgtctgccaactgcacaccagagccgtcctc
cggctccgcaccaagatcaacgagcagctcgaaacctga
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