Actinosynnema mirum: Amir_5943
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Entry
Amir_5943 CDS
T00957
Name
(GenBank) transcriptional regulator, IclR family
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
ami
Actinosynnema mirum
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ami03000
]
Amir_5943
Transcription factors [BR:
ami03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Amir_5943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
Dimerisation
TrmB
MarR
HTH_36
HTH_20
HTH_47
HTH_Crp_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ACU39751
UniProt:
C6WEX6
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All DBs
Position
6988978..6989751
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AA seq
257 aa
AA seq
DB search
MEGACPKVSRESGGVQSLQRAFDLLERLADAGGEASLSELAAVSGLPLPTIHRLIRTLVD
LGYVRQHDNRRYALGPRLIRLGEGAGRQFGTWARPLLAELVDETGETANLAVLDGDEIVY
VAQAPSRHSMRMFTEVGRRVLPHATGVGKAVLAALPRDRARELLERTGLPARTPNTITDL
GAMLAELDLVAARGHALDEGEQELGVRCVAVAVPGGPTPAAVSVSGPEGRLTREAAEGIT
GLLHGIADRLASRPTMG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcgtgtccgaaggtgtcgcgcgagagcggtggcgtgcagtccctccagcga
gccttcgacctgctggagcggctcgccgacgcgggcggtgaggcgagcctgtcggagctg
gcggccgtctccgggctgccgctgccgaccatccaccggctcatccgcaccctggtcgac
ctgggctacgtgcgccagcacgacaaccgccggtacgcgctcggcccgaggctgatccgg
ctcggcgagggcgcgggcaggcagttcggcacgtgggcgcgcccgctgctggccgagctg
gtggacgagaccggcgagacggcgaacctggcggtgctcgacggcgacgagatcgtgtac
gtggcgcaggccccgtcgcggcactcgatgcggatgttcaccgaggtcggcaggcgggtg
ctgccgcacgcgaccggcgtcggcaaggcggtgctggccgcgctgccccgcgaccgggcg
cgggagctgctggagcgcaccgggctgcccgcgcgcaccccgaacacgatcaccgacctg
ggcgcgatgctggccgagctggacctggtcgccgcgcgcgggcacgcgctggacgagggc
gagcaggagctgggcgtgcggtgcgtggcggtggccgtgccgggcggtccgacgcccgcg
gcggtgtcggtgtccggtccggagggacggctgacgcgggaggcggcggaggggatcacc
gggctgctgcacgggatcgccgaccggctggcctcgcgtcccacgatgggctga
DBGET
integrated database retrieval system
