Actinosynnema mirum: Amir_5964
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Entry
Amir_5964 CDS
T00957
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ami
Actinosynnema mirum
Pathway
ami03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Amir_5964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ami03019
]
Amir_5964
03009 Ribosome biogenesis [BR:
ami03009
]
Amir_5964
03036 Chromosome and associated proteins [BR:
ami03036
]
Amir_5964
Enzymes [BR:
ami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Amir_5964
Messenger RNA biogenesis [BR:
ami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Amir_5964
Ribosome biogenesis [BR:
ami03009
]
Eukaryotic type
90S particles
RNase
Amir_5964
Prokaryotic type
rRNA processing factors
Amir_5964
Chromosome and associated proteins [BR:
ami03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Amir_5964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ACU39772
UniProt:
C6WEZ7
LinkDB
All DBs
Position
complement(7009554..7010357)
Genome browser
AA seq
267 aa
AA seq
DB search
MGGRSPRGRSVDRTPLLEALGVPLDAELLTLALTHRSYAYENGGLPPNERLEFLGDAVLG
LVVTDHLYRAHPDRPEGQLAKLRASVVNMHALAGVARGLGADGLGGHLLLGRGEELTGGR
DKASILADGLEAVIGAVYLQFGIDTARQLVHHLFDPLLAEAPLRGAGLDWKTSLQELTAS
SGLGVPEYRVDDQGPDHRKEFTATVYVGGKPHGSGDGRTKKEAEQKAAEAAYRVLSEKAD
DGEDAADGAEQNGQGSANQRTSPNQED
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggggggtaggtcgccgcgcggtcggtccgtcgaccgcaccccgctgcttgaagcgctc
ggcgtccctctggacgccgagctgctcacgctcgccctgacccaccgctcgtacgcgtac
gagaacggcggcctgccgccgaacgagcggttggagttcctgggcgacgcggtgctcggg
ctcgtcgtgacggaccacctgtaccgcgcgcaccccgaccgccccgaggggcagttggcg
aagctgcgggccagcgtggtcaacatgcacgcgctcgcgggcgtcgcccgcgggctcggc
gcggacgggctcggcggtcacctgctgctcggccgcggcgaggagctcaccgggggcagg
gacaaggcgagcattctcgccgacggcctcgaagccgtcatcggagcggtgtacctgcag
ttcgggatagacaccgcacgtcagctggtccaccacctgttcgacccgctgctggccgag
gcgccgctccggggcgcgggtctggactggaagaccagcttgcaggagctgaccgcctcg
tcagggctgggcgtccccgagtaccgggtggacgaccaggggccggaccaccgcaaggag
ttcaccgcgacggtgtacgtcggtggcaagccccacggttcaggcgatggccgcaccaag
aaggaagccgagcagaaggcggccgaggccgcttaccgcgtgctgtccgagaaggcagac
gacggcgaggacgcggccgacggcgcggagcagaacggccagggctcggcgaaccagcgg
acttcacccaaccaggaagactga
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integrated database retrieval system
