Actinosynnema mirum: Amir_5982
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Entry
Amir_5982 CDS
T00957
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ami
Actinosynnema mirum
Pathway
ami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Amir_5982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_5982
Enzymes [BR:
ami01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Amir_5982
DNA repair and recombination proteins [BR:
ami03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Amir_5982
Prokaryotic type
Amir_5982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACU39789
UniProt:
C6WF14
LinkDB
All DBs
Position
complement(7028478..7029152)
Genome browser
AA seq
224 aa
AA seq
DB search
MGRPLEEVVEEGWARALAPVADQISKMGDFLRDEVAAGRTYLPAGENVLRAFKQPFDGVR
VLIVGQDPYPTPGHAVGLSFSVSPETRPIPKSLQNIFAELGADLGHPMPSNGDLTPWTEQ
GVLLLNRVLTVRPRNSNSHQNKGWEKVTEQAVRALAARGVPLVGLLWGRNARNLRPLLEP
YPCVEGVHPSPMSAAGGFFGSKPFSQVNALLEQQGAEPVDWKLP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtgggacgtcctttggaagaagtcgtcgaagagggctgggcgcgggcactcgcgccggtg
gccgaccagatcagcaagatgggggatttcctccgggatgaggtcgccgcggggcgcacc
tacctgcccgcgggggagaacgtgctgcgggcgttcaagcagccgttcgacggcgtgcgc
gtgctgatcgtgggtcaggacccgtacccgacaccggggcacgcggtgggcctgagcttc
tcggtctcgccggagacccggcccatccccaagagcctgcagaacatcttcgcggagctg
ggcgccgacctcgggcacccgatgccgtccaacggcgacctgacgccgtggaccgagcag
ggcgtgctgctgctcaacagggtgctcacggtccggccgcgcaactccaactcccaccag
aacaagggctgggagaaggtgaccgagcaggcggtgcgcgcgctggccgcgcgcggtgtg
ccgctggtgggcctgctgtggggccgcaacgcccgcaacctccggccgctgctggagcct
tacccgtgcgtggagggcgtgcacccgagcccgatgtccgccgcgggcgggttcttcggc
tcgaagccgttcagccaggtgaacgcgctgctggagcagcagggcgccgagccggtggac
tggaagctgccgtaa
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