Actinosynnema mirum: Amir_6543
Help
Entry
Amir_6543 CDS
T00957
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ami
Actinosynnema mirum
Pathway
ami03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Amir_6543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ami03019
]
Amir_6543
03110 Chaperones and folding catalysts [BR:
ami03110
]
Amir_6543
03029 Mitochondrial biogenesis [BR:
ami03029
]
Amir_6543
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ami04147
]
Amir_6543
Enzymes [BR:
ami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Amir_6543
Messenger RNA biogenesis [BR:
ami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Amir_6543
Chaperones and folding catalysts [BR:
ami03110
]
Heat shock proteins
HSP60 / Chaperonin
Amir_6543
Mitochondrial biogenesis [BR:
ami03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Amir_6543
Exosome [BR:
ami04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Amir_6543
Exosomal proteins of other body fluids (saliva and urine)
Amir_6543
Exosomal proteins of breast cancer cells
Amir_6543
Exosomal proteins of colorectal cancer cells
Amir_6543
Exosomal proteins of bladder cancer cells
Amir_6543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4843
Motif
Other DBs
NCBI-ProteinID:
ACU40343
UniProt:
C6WLV8
LinkDB
All DBs
Position
complement(7685657..7687282)
Genome browser
AA seq
541 aa
AA seq
DB search
MPKQISFDEDARRALERGVNKLADTVKVTLGPRGRHVVLDKKFGGPTVTNDGVTIAREIE
LDDPFENLGAQLAKSVATKTNDIAGDGTTTATVLAQAMVRVGMRNVAAGANPTALGKGVQ
AAADAVVDALKAKATPVKGRDNIAQVGTVSSRDESIGSLLGEAIEKVGEDGVITVEESST
MATELHITEGVQFDKGYVSAHFATDLEAQETVFEDARILLHREKISALADLLPLLEKVAE
AGKPLVIIAEDVEGEALSTLVVNALRKTLRVVAVKAPFFGDRRKAFLDDLAVVTGGQVIA
AEVGLKLSEAGLDVLGAARRVVVSKDNTTIVDGAGAKADVAGRAEQLRREIEASDSDWDR
EKLQERLAKLSGGIAVIKVGAATETELKERKHRIEDAVAATKAAVEEGIVPGGGSALIHA
SKVLDGGLGLTGDEATGVALVREALGAPLFWIAANGGQEGAVAVNKVREADWGFGLNAAT
LTYGDLLEAGIIDPVKVTRSAVTNAASIARMVLTTESAIVEKKEEEPAGAGGHGHGHGHG
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcagatcagcttcgacgaggacgctcgtcgggcgctcgagcgcggcgtgaac
aagctggcggacacggtcaaggtcacccttggcccgcgtggtcgccacgtcgtgctggac
aagaagttcggcggccccacggtcaccaacgacggcgtcaccatcgctcgcgagatcgag
ctggacgacccgttcgagaacctgggcgcgcagctcgccaagagcgtcgcgaccaagacc
aacgacatcgccggtgacggcaccacgaccgcgaccgtgctggcgcaggcgatggtccgc
gtcgggatgcggaacgtggcggcgggcgccaacccgaccgcgctcggcaagggcgtccag
gccgccgccgacgccgtcgtggacgcgctcaaggccaaggccaccccggtcaagggccgc
gacaacatcgcccaggtcggcaccgtgtcctcccgcgacgagtcgatcggctcgctgctc
ggcgaggccatcgagaaggtcggcgaggacggcgtcatcaccgtcgaggagtcctcgacg
atggcgaccgagctgcacatcaccgagggcgtgcagttcgacaagggctacgtgtcggcg
cacttcgccaccgacctcgaggcccaggagacggtgttcgaggacgcccgcatcctgctg
caccgcgagaagatctcggcgctggccgacctgctcccgctgctggagaaggtcgccgag
gcgggcaagccgctcgtcatcatcgccgaggacgtcgagggcgaggcgctgtccaccctg
gtggtcaacgccctgcgcaagacgctgcgcgtggtcgcggtcaaggcgccgttcttcggc
gaccgccgcaaggcgttcctggacgacctcgcggtcgtcaccggcggccaggtcatcgcc
gccgaggtgggcctgaagctgtccgaggccggtctcgacgtgctgggcgccgcccgccgc
gtcgtggtctccaaggacaacaccacgatcgtggacggcgcgggcgccaaggcggacgtg
gccggtcgcgcggagcagctgcgccgcgagatcgaggccagcgactccgactgggaccgc
gagaagctgcaggagcggctggccaagctgtccggcggcatcgccgtgatcaaggtcggc
gcggccaccgagaccgagctcaaggagcgcaagcaccgcatcgaggacgcggtcgccgcc
accaaggccgcggtcgaggagggcatcgtccccggcggcggttcggcgctgatccacgcg
tcgaaggtgctcgacggcgggctcggcctgaccggcgacgaggccaccggtgtcgccctg
gtccgcgaggcactgggcgccccgctgttctggatcgccgcgaacggcggccaggagggc
gcggtcgcggtcaacaaggtccgcgaggccgactggggcttcggcctcaacgccgcgacg
ctgacctacggcgacctgctcgaggcgggcatcatcgacccggtgaaggtgacccgctcc
gcggtcaccaacgccgcctcgatcgcccgcatggtgctcaccacggagagcgccatcgtg
gagaagaaggaagaggagcccgccggggccggtggccacggccacgggcacggccacggg
cactga
DBGET
integrated database retrieval system
