Actinosynnema mirum: Amir_6581
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Entry
Amir_6581 CDS
T00957
Name
(GenBank) tRNA-pseudouridine synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ami
Actinosynnema mirum
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ami03016
]
Amir_6581
Enzymes [BR:
ami01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Amir_6581
Transfer RNA biogenesis [BR:
ami03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Amir_6581
Prokaryotic type
Amir_6581
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
PnpCD_PnpD_N
Motif
Other DBs
NCBI-ProteinID:
ACU40379
UniProt:
C6WLZ4
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All DBs
Position
complement(7728291..7729235)
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AA seq
314 aa
AA seq
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MSDSSTTREPVAPTGGGGLAGVPGADGDGAGDGGGRVRVRLDLAYDGTEFSGWARQPNRR
TVCGVLEDTMSTVLREDVVLTVAGRTDAGVHAAGQVAHVDLPEAADVAGLPKRLARALPA
DVRVFSARVVPAAFDARFAALRRHYEYRVTDAPFGAHPLRRLDTLAWPRQLDVAAMNAAS
GLMLGERDFCAYCRRREGATTIRELQRLEWVREGDLLTAFVSADAFCHSMVRSLVGALLA
VGEGRKPVEWPASLLSLHSRSSEVTVAPPHGLSLVRVDYPADEDLAARAEITRNIRVRVA
ERPAGWPGGSPPEA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
ctgagcgactccagcaccacccgcgagcccgtcgcccccaccgggggcggcgggctcgcc
ggtgttccgggtgctgacggggacggcgccggtgacgggggcggccgagtccgcgtccgg
ctggacctggcgtacgacggcaccgagttctccggctgggcccgccagccgaaccgccgc
acggtctgcggggtgctggaggacaccatgtccacggtgctgcgcgaggacgtcgtgctg
accgtggcaggccgcaccgacgccggcgtgcacgcggccgggcaggtggcgcacgtcgac
ctgccggaggccgccgacgtggccgggctgcccaagcggctggcccgcgcgctgcccgcc
gacgtccgggtgttctcggcgcgggtcgtgcccgccgccttcgacgcccgcttcgcggcg
ctgcggcggcactacgagtaccgggtgaccgacgcgccgttcggcgcgcacccgctgcgc
aggctggacaccctcgcctggccccgtcagctcgacgtggcggcgatgaacgccgcgtcc
gggctcatgctgggggagcgggacttctgcgcctactgccgccgcagggagggcgccacg
acgatccgggagctccagcggctggagtgggtgcgcgagggcgacctgctgaccgcgttc
gtctcggcggacgccttctgccactcgatggtgcggagcctggtgggggccctgctcgcg
gtgggcgaggggcgcaagccggtggagtggcccgcgtcgctgctgtcgctgcacagccgg
tccagcgaggtgacggtggccccgccgcacgggctgtccctggtgcgggtggactacccg
gccgacgaggacctggcggctcgggccgagatcacgcggaacatccgggtgcgggtcgcg
gagcggcccgcagggtggcctggagggtcgccgcctgaagcgtga
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