Actinosynnema mirum: Amir_6583
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Entry
Amir_6583 CDS
T00957
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ami
Actinosynnema mirum
Pathway
ami03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Amir_6583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ami03021
]
Amir_6583
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_6583
Enzymes [BR:
ami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Amir_6583
Transcription machinery [BR:
ami03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Amir_6583
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Amir_6583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ACU40381
UniProt:
C6WLZ6
LinkDB
All DBs
Position
complement(7729881..7730933)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPSLSEEAVSETRSRFVIEPLEPGFGYTLGNSIRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDLHIATLNGKGKLEIELVVERGRGYVPAVQNKQAGAEIGRIPVDSIYSPVMKVTYKVEA
TRVEQRTDFDKLILDVESKPSITPRDAVASAGKTLVELFGLARELNVDAEGIEIGPSPAE
ADTIAAFAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKMK
LVGLGLALKDSPPGFDPSAAASDYPAEGWGADSSVDSHDDGQDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatttcccagcgcccctcgctcagcgaggaagcggtcagcgagacccgctcccgg
ttcgtcatcgagccgctggagccgggtttcggctacaccctcggcaactccatccgccgc
accctgctgtcctccatccccggcgcggccgtgaccagcatccgcatcgacggcgtgctg
cacgagttcaccaccgtgcccggtgtgaaggaggacgtcaccgacatcatcctcaacctc
aaggagctggtcgtcagctccgaggaggacgagccggtgaccatgtacctgcgcaagcag
gggcccggtgcggtgaccgccggtgacatcgtgcccccggccggtgtgaccgtgcacaac
cccgacctgcacatcgccaccctgaacggcaagggcaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctacgtccccgccgtccagaacaagcaggccggtgccgagatcggc
cgcatccccgtcgactcgatctactcgcccgtcatgaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcggaccgacttcgacaagctgatcctcgacgtcgagagcaagccc
tccatcacgccgcgcgacgccgtggcgtcggcgggcaagaccctggtggagctgttcggc
ctcgctcgcgagctgaacgtcgacgccgagggcatcgagatcggaccctcgcccgccgag
gcggacaccatcgcggcgttcgcgatgccgatcgaggacctggacctcaccgtccggtcc
tacaactgcctcaagcgcgagggcatccacacggtgggcgagctcgtctcgcgcagcgag
gcggacctgctggacatccgcaacttcggcgcgaagtccatcgacgaggtcaagatgaag
ctcgtcggtctgggcctcgcgctgaaggacagccctcccgggttcgacccctcggccgcc
gcgtccgactaccccgctgaggggtggggcgcggactcgtccgtggactcccacgacgac
ggccaggactacgcggagaccgagcagctctga
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