Actinosynnema mirum: Amir_6871
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Entry
Amir_6871 CDS
T00957
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
ami
Actinosynnema mirum
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_3
PAS_4
PAS
PAS_8
PAS_11
Motif
Other DBs
NCBI-ProteinID:
ACU40667
UniProt:
C6WQX4
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Position
complement(8006391..8008553)
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AA seq
720 aa
AA seq
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MTERAGHLVAPSGRSHNTDPALRAGAESFARTWATAVIGSSYVPMTRSEVVEHLRALTEV
LVTALLATPFRPAPGHEIGARLVEAHFTGTDTLGRTVQLMGDDLCAELGIPADDSTRTRL
AALQGALAAGYARALRERTLAEQEAIRAAVLDARDQAEAALRASEARFRAMFTEAAIGIG
IADVEGRILDVNQALQDMLGFGVEEMRQHNIRDLMHPEDGPSVWRLYDQLTAGERDHYRA
EKRFRRADGEQVWTHLTLSLVRDDHGDPQYQVAMIEDVTDRHLLQNRLRYQALHDPLTGL
PNRALFLDRLSRVFGNPDKHRAGLCYLDLDGFKVINDSLGHDIGDQLLVEVGRRLDRSVS
GDGKLVARMGGDEFVILVEDSTRTDDIVAVADRVLRELESPIRIGGHELTVSASIGIVER
GLEGTSAPDLVRDADITLYWAKADGKSRWALYDPDRNAKEIARFTLSATMPAALERDEFY
VDYQPLVRLENARVVGVEALVRWQHPEFGRLAPDRFIELAEETGLIVPLGRWVLRKACEQ
GRRWLDEFAELAPYVSVNLAVRQSRDPELVRDVKRILDETGLPPRHLQLELTESAIMGTA
DEPLEALRALSDMGVRIAIDDFGTGYSNLAYLKHLPVHELKIAGSFMEGLRAADEEDPVD
AQIVSTLVQLAHALGLGVTAEGVETPSQAKRLHRIGCDTGQGWFYAKPMAPEGIDEMLRR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacgggctggacacctggtggctccctcggggcgttcccacaacaccgacccg
gcgctgcgggccggggccgagtcgttcgcgcgcacctgggcgacggccgtcataggcagc
agctacgtgcccatgacccggtccgaggtggtcgagcacctgcgcgccctcaccgaggtc
ctggtgaccgcgctgctcgccaccccgttccgcccggcgcccggccacgagatcggcgcc
cggctggtcgaggcgcacttcaccggcaccgacacgctcggccgcaccgtgcagctcatg
ggcgacgacctgtgcgccgagctgggcatccccgccgacgactccacccgcacccgcctc
gccgccctgcaaggcgcgctcgcggcgggctacgcgcgcgccctgcgcgagcgcaccctc
gccgagcaggaggcgatccgcgccgccgtgctggacgcccgcgaccaggccgaggccgcg
ctgcgcgcctccgaggcccggttccgcgccatgttcaccgaggccgccatcggcatcggc
atcgccgacgtcgagggccgcatcctggacgtcaaccaggcgctgcaggacatgctcggg
ttcggcgtcgaggagatgcggcagcacaacatccgcgacctgatgcacccggaggacggg
ccgtcggtgtggcggctctacgaccagctcacggcgggcgagcgcgaccactaccgcgcg
gagaagcggttccggcgggccgacggcgagcaggtgtggacgcacctgacgctgtcgctg
gtgcgcgacgaccacggcgacccgcagtaccaggtcgccatgatcgaggacgtcaccgac
cggcacctgctgcagaaccggctgcgctaccaggcgctgcacgacccgctcaccggcctg
ccgaaccgggcgctgttcctcgaccggctcagccgggtcttcggcaaccccgacaagcac
cgcgcgggcctgtgctacctggacctcgacgggttcaaggtgatcaacgacagcctcggc
cacgacatcggcgaccagctgctcgtcgaggtcggcaggcggctggaccgctcggtgtcc
ggcgacggcaagctcgtggcgcgcatgggcggcgacgagttcgtgatcctggtcgaggac
tccacccgcaccgacgacatcgtcgccgtcgcggaccgggtgctgcgcgagctggagtcc
ccgatccgcatcggcgggcacgagctgaccgtgtccgcgtccatcggcatcgtcgagcgc
gggctggagggcaccagcgcgcccgacctggtgcgcgacgccgacatcacgctgtactgg
gccaaggcggacggcaagtcccgctgggcgctgtacgacccggaccgcaacgccaaggag
atcgcccggttcaccctgtccgccaccatgcccgccgcgctggagcgcgacgagttctac
gtggactaccagccgctggtgcggttggagaacgcgcgggtggtcggcgtggaggcgctg
gtgcgctggcagcacccggagttcgggcggctcgcgccggaccggttcatcgagctggcc
gaggagaccgggctgatcgtcccgctgggccggtgggtgctgcgcaaggcgtgcgagcag
gggcggcggtggctggacgagttcgccgagctggcgccgtacgtgagcgtgaacctggcg
gtgcggcagtcccgcgaccccgagctggtgcgcgacgtcaagcgcatcctggacgagacc
ggcctgccgccccggcacctgcagctggagctgaccgagagcgcgatcatgggcaccgcc
gacgagcccctcgaagcgctgcgggcgctgtcggacatgggcgtgcgcatagcgatcgac
gacttcggcaccggctactcgaacctggcgtacctcaagcacctcccggtgcacgagctg
aagatcgccgggtcgttcatggaggggctgcgggccgccgacgaggaggacccggtggac
gcgcagatcgtgtccacgctggtgcagctcgcgcacgcgctcggcctcggcgtgacggcg
gagggcgtggagacgccgtcgcaggccaagcggctgcaccggatcggctgcgacaccggg
caggggtggttctacgccaagccgatggccccggagggcatcgacgagatgctgcggcgc
tga
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