Aminipila terrae: Ami3637_04430
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Entry
Ami3637_04430 CDS
T06414
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
amic
Aminipila terrae
Brite
KEGG Orthology (KO) [BR:
amic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amic03009
]
Ami3637_04430 (rlmD)
Enzymes [BR:
amic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Ami3637_04430 (rlmD)
Ribosome biogenesis [BR:
amic03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ami3637_04430 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
PCMT
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
QHI71730
UniProt:
A0A6P1MAS9
LinkDB
All DBs
Position
complement(952317..953807)
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AA seq
496 aa
AA seq
DB search
MMEKGQKCQLQIDDMSNEGQGIGRIDGMAVFVKGAIPGDTVLAEITKIKKNYAFAVTKEI
VEPSPYRIDKECPYAEECGGCTYAGMSYQGQLAVKEKQVREKLIRLGGLESPELNSIVGM
DEPYAYRNKGQMPISTGGIITRKGGIIENLGKCTIGFYKAKSHDVVNCDKCLLQTPPAAA
VAQALREFMKSDNITAYDPKWEKGLMRHLVVKTAMGTGEVMAILVINGKGIPNSSKLVEM
MDEAIYALPAREDGVEYNLESVVININKGKTSEIMGKECIPIAGKPTILERVGDLEFEVS
PLAFYQVNPVQMKVLYDKVLEYAQLKGTENILDLYCGVGTIGLYCANEMRKKSSNTGKVL
GIESVKGAVMDANRNAVINGLVNTQFLYGRAEEELPKVLEGYTDKEGFEVQAFNPDVIIL
DPPRSGCASELLEAVAAAGPDKIIYVSCDPATLARDVKILGELGYQFVEGTPVDMFPWTR
HVETVILMTRCGKNDK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaaaggacaaaaatgtcaattgcagattgacgatatgagtaatgaaggacag
ggaattggtcgaattgacggcatggctgtatttgtaaaaggagccattccaggagacacc
gttcttgctgaaatcacgaagataaaaaagaattatgcttttgctgtgacaaaggagatt
gtggaaccgtccccttacaggatagacaaagagtgcccatacgcagaggagtgcggggga
tgtacttatgcagggatgagttatcagggccagcttgcagtaaaagagaaacaggtacga
gaaaaacttataagacttggaggtttggaaagccctgaattgaattctatagtgggcatg
gatgaaccctatgcataccgaaataagggtcagatgccaatcagtactggtggaatcatc
acaagaaagggcggaatcattgagaatctaggaaaatgtacaattggcttttataaagcc
aagagccacgatgtggttaactgtgacaagtgtttgttgcaaactcctcctgcagcagcg
gttgcccaggccctgagagaatttatgaagagtgacaacattaccgcttatgatccaaaa
tgggaaaaaggtctcatgagacacctggtggtgaagactgccatgggcactggggaagta
atggccatactggttataaatggaaaaggtatacctaacagttctaaattggttgaaatg
atggatgaggccatttatgcactgcctgccagagaagatggggtagagtataatctggaa
agtgttgtgattaatataaataaggggaaaacttctgaaataatggggaaagaatgcatt
cctatagcaggcaaaccaactattttggaacgagtaggagatttagagtttgaggtgtcg
ccgttagctttctatcaggttaatccggtgcagatgaaagtactttatgacaaagtactg
gaatatgcacagctgaagggcactgaaaatattttggacttatattgcggtgtaggaaca
attggactttactgtgccaatgagatgagaaaaaaatcatcaaatacaggaaaagtactt
ggcattgagtcagtaaaaggtgcagtcatggatgcaaacagaaatgcagtcataaatgga
ctggtaaatacgcagttcctttatggaagagcagaagaagaacttccaaaagtactagaa
ggatatacggataaggaaggttttgaagtacaagcatttaatcctgatgtgattattctt
gatcctccaagatccggatgtgcatcagaactgttagaagcagtggcagcagcaggtccg
gataaaatcatttacgtatcctgtgacccggcaaccctggccagagatgtaaaaatactg
ggcgaattggggtatcagtttgtagaaggaaccccagtggacatgttcccatggacgagg
cacgttgaaactgtgattctgatgacacgttgtggtaaaaacgataaataa
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