Aminipila terrae: Ami3637_12680
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Entry
Ami3637_12680 CDS
T06414
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
amic
Aminipila terrae
Pathway
amic02020
Two-component system
amic02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ami3637_12680 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ami3637_12680 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amic03021
]
Ami3637_12680 (rpoN)
Transcription machinery [BR:
amic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ami3637_12680 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Sigma70_r4
HTH_23
Sigma70_r4_2
HTH_3
HTH_Crp_2
Sigma70_r3
HTH_10
HTH_31
HTH_AsnC-type
HTH_28
HTH_Tnp_ISL3
PCI
HTH_24
TetR_N
LacI
DUF2316
HTH_IclR
HTH_Mga
HTH_5
Fe_dep_repress
HTH_AraC
HTH_21
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
QHI73137
UniProt:
A0A6P1MGX1
LinkDB
All DBs
Position
2677033..2678481
Genome browser
AA seq
482 aa
AA seq
DB search
MRLGYDLTIEQTQKLVMTPELIQAIQILQFNTQDLDNYVQEQLLVNPVLEQANHSDPGEI
SENTENANGLSERTRELDSATLGSNELSSNEWAEHIKEREYDDISYKQGEYSKDDKEYSF
EQFVTSDVTLSEHLMFQLQFAPIKQNYRTIGKYIIESLDDNGYMTLTVEEIARALNVTEE
KVNTVLSAIQGFDPAGVAAKDLKECLLIQLENRNEADETVKRVINGYLEDIAANRLATIA
KELGITVQEVQEISDLIRSLEPKPGRQFASQVTTRYIVPDIIVEKVNGEYVVTVNESSTP
KLMVSSYYEKVLQESHNDPNLTKFLSGRLNSAIWLIRSIEQRKQTIYNVVSAVVKYQQEF
FDKGSKYLKTLTLKQIAEEVGIHESTVSRSINGKYMQSPRGVYEIKYFFTSGVTGNQGEG
ISSQSIKTFIKEIVSGEDSKAPYSDQDMVRLLGEKGIEISRRTVAKYRDELNILSSSKRK
RY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagacttgggtacgatttaacaattgaacagacacagaaacttgtaatgactcctgag
ttgattcaggctatccagatattgcagtttaatacacaggatctggacaattatgtccag
gagcagcttctggtcaatcctgtgctggaacaggcaaatcactctgatccgggtgaaatc
agtgaaaatactgaaaatgcaaatgggttaagtgaaagaaccagagaacttgacagtgcc
actcttggcagtaatgaattgagcagtaatgaatgggctgaacatataaaggaaagagaa
tacgacgatatcagttacaaacagggggaatattctaaagacgataaagaatattctttt
gagcagtttgttacatcagatgttaccttatcagagcatttgatgtttcagttacagttt
gcaccgataaaacaaaattacagaactattggcaaatatataattgaatctttagacgat
aatgggtatatgaccctgacagtggaagagatagcacgggcattaaatgttactgaagaa
aaagtaaatactgtactcagtgcaattcaggggtttgatccagcaggggtggcggcaaag
gacttaaaggaatgcctgctaatccagctggaaaaccgtaatgaggcggatgagacagta
aagcgtgttataaatggttatctggaggatattgccgctaacagattggcaacaattgct
aaagaactgggaatcacagtccaggaagtacaggaaatcagtgatcttatcagaagtctg
gaaccaaaaccaggcagacagtttgcttcacaggtaactacaagatacattgttccggat
attattgttgagaaggttaatggggaatatgtggttactgtaaatgaaagcagcacacct
aaattgatggtaagttcttattatgaaaaggtattacaggaatctcacaatgatcctaac
cttaccaaattcctttcgggaagactcaactcagccatatggcttatcagaagtatcgaa
cagcgaaaacagacaatatataatgtagtcagtgctgttgtaaagtaccagcaggaattc
tttgataagggttcaaaatatttaaaaacgttaacattaaagcaaatcgccgaagaggta
ggaatacatgaatccacggtaagtcgttctataaatgggaaatatatgcagagcccaagg
ggtgtttatgaaattaagtatttctttacaagcggtgttactggaaatcagggagaaggg
atttcttcgcaaagtataaaaacatttattaaggaaatagtatctggagaagattccaaa
gcaccttacagcgaccaggatatggttagacttttaggagaaaaggggattgaaatctcc
agacgtacagtagcaaaataccgtgatgaattaaacattctttcatcttcaaagcgaaaa
agatattga
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integrated database retrieval system
