Aminipila terrae: Ami3637_15885
Help
Entry
Ami3637_15885 CDS
T06414
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
amic
Aminipila terrae
Pathway
amic02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amic00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ami3637_15885 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amic03021
]
Ami3637_15885 (rpoD)
Transcription machinery [BR:
amic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ami3637_15885 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_10
Sp-DndD
Motif
Other DBs
NCBI-ProteinID:
QHI73660
UniProt:
A0A6P1MG35
LinkDB
All DBs
Position
3296732..3297874
Genome browser
AA seq
380 aa
AA seq
DB search
MSFEEGNAMEKKDYVQDLAEKAKAKGSISFREVADYLEGIDLNKDQMDEIYDSLTAMGIE
IVSEVDPDEFELLSIEQDENDDVDIISVSDDSNEIDLEATLPKGIAVDDPVRMYLKEIGK
VPLLSADEEIELAKKMELGDEEAKKRLCEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGL
IKAVDKFDWRKGYKFSTYATWWIRQAITRSIADQARTIRIPVHMVETINKLIRISRQLLQ
EYGREPSPDEIAKEMDISEEKVREILKIAQEPVSLETPIGEEEDSHLGDFIPDEDVPAPA
EAAAFSMLKEQLVEVLDTLTEREQKVLKLRFGLEDGRARTLEEVGKRFDVTRERIRQIEA
KALRKLRHPSRSKKLKDYLE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgaggaaggaaacgctatggaaaaaaaggactatgttcaggaccttgcggaa
aaagcaaaagctaagggatcgatatcttttagggaagtagcagattatttagagggtata
gacttaaataaggatcagatggatgagatttatgattcactgacagctatggggatagaa
attgtatcagaggtcgatccggatgaattcgagcttctttctatagaacaggatgaaaat
gacgatgtagatattatttcagtttcagacgattccaatgaaattgatttagaagctaca
ttgcctaaaggaattgcggtagatgaccccgtaagaatgtatttaaaagaaatcggaaaa
gtgcctctgctgtcagcggatgaagaaatagagctggctaaaaaaatggaacttggtgat
gaggaagcaaaaaagaggctttgtgaagccaacttaagattagttgtaagtattgccaag
cgttacgttggaaggggaatgctgtttcttgacctgattcaggaaggaaatcttggatta
attaaagcagtagataagtttgactggagaaaaggatataagttcagtacttatgccaca
tggtggatcagacaggcaattaccagatctattgctgaccaggcaagaaccattcgtata
cctgtacacatggtagaaaccattaacaaacttatccgtatatcaaggcagttgcttcag
gaatatggcagagagccttctccagatgaaatagctaaggaaatggatatttccgaggaa
aaggtaagagaaattttaaaaattgctcaggagccagtgtcacttgaaactcctatcggt
gaggaagaagacagccatcttggagactttattcctgacgaagatgttcctgcacctgct
gaggctgcggcattttcaatgcttaaggagcagcttgttgaagtactggatactttgact
gaaagagagcagaaagttttaaagctgcgttttggactggaagatggcagagccagaact
cttgaagaagttggaaaaaggtttgatgtaacaagagaaagaataagacagattgaagca
aaagctttaagaaaactgagacatccttcaagaagcaaaaaacttaaggactatctggaa
taa
DBGET
integrated database retrieval system
