Aminobacter sp. MSH1: CO731_00212
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Entry
CO731_00212 CDS
T05420
Symbol
rpoN2
Name
(GenBank) RNA polymerase sigma-54 factor 2
KO
K03092
RNA polymerase sigma-54 factor
Organism
amih
Aminobacter sp. MSH1
Pathway
amih02020
Two-component system
amih02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CO731_00212 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CO731_00212 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amih03021
]
CO731_00212 (rpoN2)
Transcription machinery [BR:
amih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CO731_00212 (rpoN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AWC20771
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All DBs
Position
complement(206249..207784)
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AA seq
511 aa
AA seq
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MALSAKLQLRQSQSLVMTPQLMQSIRLLQFTHTELERFIDDEIERNPLLERAEAPEDAPG
DQFPKIETQGEANAAPSDDWFEGEAGWSSEAISEKLDTSLENLFPDDPGAVERMGPDLAM
QWKSASAGSSSGGSSEGFDMEDMAAAAVTLRDHVGEQISFAFVDLAERLVASELTDWLDE
AGYFRGEPVEIAGRFGVDEAFVLRVLAGCQGFDPAGLFARDLAECLRIQLGRRDRLDPAM
AALVDNLELLAKRDFQSLKRICGVDEEDLLAMLAEIRALDPRPGGGFVGGAADTIVPDVE
VRQAADGSWAVELNPETLPRVLVDQVYFAEVTGRTKDQGERNFLSECLQNANWLTRSLDQ
RAKTILKVAAEIVRQQDAFLVHGVRHLRPLNLRTVADAIGMHESTVSRVTANKYMLTTRG
VFELRYFFTASIASAEGGEAHSSEAVRDRIRQMIEEEQVADVLSDDAIVDILKKSGVDIA
RRTVAKYREGMNIASSVQRRREKRAIAGTAN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcggcaaaactacagctacggcagtcgcagtccctggtgatgacgccccag
ctgatgcagtcgatccggctgctgcagttcacccacaccgagcttgagcgtttcatcgac
gacgagatcgagcgcaatcccctgttggaacgcgccgaagcgcccgaagacgcgcccggc
gaccagtttccgaagattgaaacgcaaggcgaggccaacgctgcgccgagcgacgactgg
ttcgaaggcgaggccggctggagttccgaagccatctccgaaaagctcgacacttcgctc
gagaacctgtttcccgacgatcccggtgccgtcgagcgaatgggcccggaccttgccatg
cagtggaagtcggcctccgccggttccagctccggcggctcgtccgaaggcttcgacatg
gaggatatggccgctgcagcagtgacactgcgcgatcatgtcggcgagcagatttcattc
gcctttgtcgatctggcggagcggctggtcgcttccgaattgaccgactggcttgacgag
gcgggctacttccgaggcgagcctgtcgagatcgccggccggttcggcgtcgacgaggca
tttgtgctgagggtacttgccggctgccagggcttcgatccggctggcctgtttgcgcgc
gaccttgccgagtgcctgcgcatccagcttgggcgccgcgaccgcctcgatccggcgatg
gcggcactggtcgacaatctcgaactgttggccaagcgcgatttccagagcctcaagcgc
atctgtggcgtcgacgaggaggatctgctcgccatgctggccgagatccgtgccctcgac
cccaggccgggcggcggctttgtcggaggtgctgccgacaccatcgtgcccgacgtcgag
gtgcgccaggccgccgacggcagctgggccgtcgaactcaaccccgagaccttgccacgc
gtcctggtcgaccaggtctatttcgccgaggtgacgggccgcaccaaggaccaaggcgag
cgcaacttcctctccgagtgcctgcagaatgccaactggctgacgcgcagcctcgaccag
cgcgccaagaccatcctcaaggtcgccgccgagatcgtccgccagcaggacgccttcctc
gtccatggcgtgcgccatctcaggcctctcaacctgcgcacggtcgccgacgccatcggc
atgcatgaatcgacggtcagccgcgtcacggccaacaaatacatgctgacgacgcgcggc
gtgttcgaactgcgctacttcttcaccgcctcgatcgcgtctgccgagggcggcgaggcc
cactcttcagaggcagtcagggaccggattcgacagatgatcgaggaggagcaggtcgcc
gacgtgctttcggacgatgccattgtggatatcttgaagaaaagtggcgtggacatcgct
cgccgcaccgtcgcaaaatatcgtgagggcatgaacatcgcctcgtcggtgcagcgccgg
cgcgaaaagcgcgctatagcaggtaccgcgaactag
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