KEGG   Aminobacter sp. MSH1: CO731_00249
Entry
CO731_00249       CDS       T05420                                 
Symbol
rnd_1
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
amih  Aminobacter sp. MSH1
Brite
KEGG Orthology (KO) [BR:amih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amih03016]
    CO731_00249 (rnd_1)
Enzymes [BR:amih01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CO731_00249 (rnd_1)
Transfer RNA biogenesis [BR:amih03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CO731_00249 (rnd_1)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AWC20808
UniProt: A0A2S0XCM7
LinkDB
Position
complement(238831..239448)
AA seq 205 aa
MTIRFHKHDLPDLTHYDVDAVAIDTETLGLNPHRDRLCVVQISPGDGTADVIQIAPGQKK
APNLTSLLRNRKVTKLFHFGRFDIAVLYNAFGVMAEPVFCTKIASRLTRTYTDRHGLKDI
CNELLGVSLSKQQQSSDWAAETLSPEQLEYAASDVLYLHRLRDVLAGRLERDGRTKEAEA
CFRFLPVRAKLDLMGWDEEDIFAHS
NT seq 618 nt   +upstreamnt  +downstreamnt
atgaccatccgctttcacaagcacgacctgcccgacctcacgcactacgacgtcgatgcg
gtcgccatcgacaccgagacgctggggctgaacccgcatcgcgaccggctttgcgtcgtt
cagatctcgccgggcgacggcaccgccgacgtgatccagatcgcgcccgggcagaagaag
gcgccgaacctgacgagcctgctcaggaaccgcaaggtgaccaagctgttccatttcggc
cgcttcgacatcgccgtgctctacaacgccttcggcgtcatggccgagccggtgttctgc
accaagatcgcctcgcgcctgacccgcacctacaccgaccgccacggcctcaaggacatc
tgcaacgagcttctcggcgtcagcctgtcgaagcagcagcagtcgtcggactgggcagcc
gagacgttgtcgcccgagcagctcgaatatgctgcatccgacgtgctttacctgcatcgg
ctgcgcgacgtgctggccggcaggttggagcgcgacggccgcaccaaggaggccgaggcc
tgcttccgcttcctgcccgtccgggcgaagctcgacctgatgggctgggacgaagaggac
attttcgcccatagctga

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