Aminobacter sp. MSH1: CO731_00249
Help
Entry
CO731_00249 CDS
T05420
Symbol
rnd_1
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amih
Aminobacter sp. MSH1
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amih03016
]
CO731_00249 (rnd_1)
Enzymes [BR:
amih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CO731_00249 (rnd_1)
Transfer RNA biogenesis [BR:
amih03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CO731_00249 (rnd_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AWC20808
UniProt:
A0A2S0XCM7
LinkDB
All DBs
Position
complement(238831..239448)
Genome browser
AA seq
205 aa
AA seq
DB search
MTIRFHKHDLPDLTHYDVDAVAIDTETLGLNPHRDRLCVVQISPGDGTADVIQIAPGQKK
APNLTSLLRNRKVTKLFHFGRFDIAVLYNAFGVMAEPVFCTKIASRLTRTYTDRHGLKDI
CNELLGVSLSKQQQSSDWAAETLSPEQLEYAASDVLYLHRLRDVLAGRLERDGRTKEAEA
CFRFLPVRAKLDLMGWDEEDIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgctttcacaagcacgacctgcccgacctcacgcactacgacgtcgatgcg
gtcgccatcgacaccgagacgctggggctgaacccgcatcgcgaccggctttgcgtcgtt
cagatctcgccgggcgacggcaccgccgacgtgatccagatcgcgcccgggcagaagaag
gcgccgaacctgacgagcctgctcaggaaccgcaaggtgaccaagctgttccatttcggc
cgcttcgacatcgccgtgctctacaacgccttcggcgtcatggccgagccggtgttctgc
accaagatcgcctcgcgcctgacccgcacctacaccgaccgccacggcctcaaggacatc
tgcaacgagcttctcggcgtcagcctgtcgaagcagcagcagtcgtcggactgggcagcc
gagacgttgtcgcccgagcagctcgaatatgctgcatccgacgtgctttacctgcatcgg
ctgcgcgacgtgctggccggcaggttggagcgcgacggccgcaccaaggaggccgaggcc
tgcttccgcttcctgcccgtccgggcgaagctcgacctgatgggctgggacgaagaggac
attttcgcccatagctga
DBGET
integrated database retrieval system