KEGG   Aminobacter sp. MSH1: CO731_00251
Entry
CO731_00251       CDS       T05420                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
amih  Aminobacter sp. MSH1
Pathway
amih03030  DNA replication
amih03410  Base excision repair
amih03420  Nucleotide excision repair
amih03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CO731_00251 (polA)
   03410 Base excision repair
    CO731_00251 (polA)
   03420 Nucleotide excision repair
    CO731_00251 (polA)
   03440 Homologous recombination
    CO731_00251 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amih03032]
    CO731_00251 (polA)
   03400 DNA repair and recombination proteins [BR:amih03400]
    CO731_00251 (polA)
Enzymes [BR:amih01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CO731_00251 (polA)
DNA replication proteins [BR:amih03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CO731_00251 (polA)
DNA repair and recombination proteins [BR:amih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CO731_00251 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CO731_00251 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 HHH_2 POR HHH IMS_HHH DprA_N
Other DBs
NCBI-ProteinID: AWC20810
UniProt: A0A2S0XCP9
LinkDB
Position
241692..244670
AA seq 992 aa
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLMLDARNTEAGVV
PTHFAVIFDYSSKTFRNELYPEYKANRSAPPEDLIPQFGLIRQATKAFELPCIEMEGFEA
DDLIATYARLACEAGGDTTIVSSDKDLMQLVGPSVSMYDPMKDRQINVPEVVEKWGVQPE
KMIDLQALTGDSVDNVPGVPGIGPKTAAQLLEQFGDLDTLLARAAEIKQDKRRQSIIDNA
DKARISRELVRLKVDVPVTDVLEDFVLQPPNGPKLIGFLKTMEFTSLTRRVAEATGTEAG
EVEAVPVSVQWGADAHGPDVGSGAAPAATAAAPAARANGGNAAAAAPSSASAESGNVHDT
PTALANKIAERAASQKFDHAAYVTIRDLATLNNWIAEARQAGVVAFDTKTTSLDPMQAEL
VGFSLAMAPGRAAYVPLAHKSGRGDLLGGGLVENQVPVRDAIAALKALLEDASVLKVAQN
LKYDLVVLDRHGIDVHSFDDTMLLSYVLDGGTNGGHGTDSLSEKWLGHTPIPFKEIAGSG
RNVVGFDQVDIDKATAYAAEDADVALRLWRVLKPRLAAKGVVSVYERLERPLVPVLARME
QRGISVDRQILSRLSGELAQGAARLEDEINAIAGERFNIGSPKQLGDILFGRMGLPGGTK
TKTGQWSTSAQVLEDLAAEGHELPRKIVDWRQMTKLKSTYTDALPGFINPETKRVHTSYA
LAATTTGRLSSSDPNLQNIPIRTTEGRKIRTAFIADKGNKLISADYSQIELRVLAHVADI
GQLKQAFADGVDIHAMTASEMFSVPVEGMPSEIRRRAKAINFGIIYGISAFGLANQLSIP
REEASDYIRKYFERFPGIRAYMDETKAFCRENGYVETIFGRRIHYPEIRSSNPSVRAFNE
RASINARLQGTAADIIRRAMIRMEDALIAARLSARMLLQVHDELIFETVEHEVEATIPVV
RHVMENAAMPAVSMSVPLHVDAHGANSWDEAH
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgaaaaaaggcgatcatctcttccttgtcgacggctccggctacatcttccgcgcctat
catgcgctgccgccgctgacccgcaagtccgacggccttccggtcggtgccgtctcaggt
ttctgcaacatgttgtggaagctgatgctcgacgcacgcaacaccgaagctggggtcgtg
ccgacgcatttcgcggtcatcttcgactattcctcgaagaccttccgcaacgagctctac
cccgagtacaaggccaaccgctcggcgccgccggaagacctgatcccgcaattcggcctg
atcaggcaggcgaccaaggcgttcgagctgccctgcatcgagatggagggtttcgaggcc
gacgatttgatcgccacctatgcccggctcgcctgcgaggccggcggcgacaccaccatc
gtctcctccgacaaggacctgatgcagctcgtcggtcccagcgtgtcgatgtacgacccg
atgaaggatcgccagatcaatgtccccgaggtcgtcgagaagtggggcgtgcagcccgag
aagatgatcgacctgcaggcgctgaccggcgactcggtcgacaacgttccgggcgtgccc
ggcatcggcccgaagacggcggcacagctgctcgaacagttcggcgacctcgacacgctg
ctcgcgcgcgccgccgagatcaagcaggacaagcgccgccagtcgatcatcgacaacgcc
gacaaggcgcgcatttcgcgcgagctggtgcggctcaaggtcgacgtgccggtgaccgac
gtgctcgaagacttcgtgctgcagccgcccaacgggccgaagctgatcggcttcctcaag
acgatggaattcacctcgctgacgcgccgcgtcgccgaggccaccggcacggaggccggc
gaggtcgaggctgtgcctgtcagcgtgcagtggggcgctgacgcgcatgggcctgacgtc
ggttcgggagcggcaccggcggcgaccgccgcggctcctgcagcgcgtgcgaacggaggc
aacgctgcagctgcagccccctcgtccgcctctgccgaaagcggcaacgtgcacgacact
cccaccgccctcgccaacaagatcgccgaacgggcagcctcgcaaaagttcgaccatgcc
gcctatgtcaccatccgcgacctggcgaccctgaacaactggatcgccgaggcaagacag
gccggcgtcgtcgccttcgacaccaaaaccacctcgctcgacccgatgcaggccgaactg
gtcggcttttcgctggcaatggcacccggtcgcgccgcctatgtgccgctggcccacaag
agcggccgcggcgatcttctcggcggcggactggtcgagaaccaggtacccgtgcgcgac
gcgatcgccgcactcaaggcgctgctcgaagacgcctccgtgctcaaggtggcgcagaac
ctgaaatacgatctcgtggtgctggaccggcacggcatcgacgtgcactcgttcgacgac
acgatgctgttgtcctacgtgctcgacggcggcaccaatggcggccacggcacggattcc
ctgtcggagaagtggctcggccacacgccgatcccgttcaaggagattgccggttcgggc
aggaatgtcgtcggcttcgaccaggtcgacatcgacaaggcgacggcctatgcggccgag
gacgccgacgtggcgctgcggctgtggcgcgtgctcaagccgcgcctcgctgccaagggc
gtggtctcggtctacgagcggctggaacggccgctggtgccggtgctggcgcgcatggaa
cagcgcggcatctcggtcgaccgccagatcctgtcgcggctttcgggcgaactggcccag
ggtgctgcccgtctcgaagacgaaatcaacgcaatcgccggcgagcgcttcaacatcggc
tcgcccaagcagctcggcgacatcctgttcggccgcatgggcctgcccggcggaaccaag
accaagacgggccagtggtcgacttcggcgcaggtgctggaagacctcgccgccgaaggc
cacgagctgccgcgcaagatcgtcgactggcgccagatgaccaagctcaagtcgacctac
accgacgccctgcccggcttcatcaatcccgagaccaagcgcgtccacacctcctacgcg
ctcgccgccaccacgacgggacggctgtcgtcgtcggacccgaacctgcagaacatcccg
atccgcaccaccgaaggccgcaagatccgcactgccttcattgccgacaagggcaacaag
ctgatctcggcagactacagccagatcgagctgcgcgtgcttgcccatgtcgccgacatc
ggccagctcaagcaggccttcgccgacggcgtcgacatccatgcgatgacggcgtccgag
atgttctcggttccggtggaaggcatgccgtcggagatccgccgtcgggccaaggcgatc
aatttcggcatcatctacggcatctccgccttcggcctcgccaaccagctgtcgatcccg
cgcgaggaagcctccgactacatcaggaagtatttcgagcgcttccccggtatccgcgcc
tacatggacgagaccaaggcgttctgccgcgagaacggctatgtcgagaccatcttcggc
cggcgcatccactatccggaaatccggtcgtccaatccctcggtgcgcgccttcaacgaa
cgcgcctcgatcaacgcacgcctgcagggtacagcagccgacatcatccgccgcgccatg
atccgcatggaggacgctctcatcgccgccagactgtcggctcggatgctgctgcaggtg
cacgacgaactgattttcgaaaccgtcgagcacgaggtcgaggcaaccatccccgtcgtc
cgccatgtcatggaaaacgccgccatgccggcggtgtcgatgtcggtgccgctgcatgtc
gacgcccatggcgccaacagctgggacgaggcgcattga

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