Aminobacter sp. MSH1: CO731_00626
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Entry
CO731_00626 CDS
T05420
Symbol
ddpA_3
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
amih
Aminobacter sp. MSH1
Pathway
amih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CO731_00626 (ddpA_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amih02000
]
CO731_00626 (ddpA_3)
Transporters [BR:
amih02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CO731_00626 (ddpA_3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
YaiA
Motif
Other DBs
NCBI-ProteinID:
AWC21178
UniProt:
A0A2S0XDP0
LinkDB
All DBs
Position
complement(651317..652894)
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AA seq
525 aa
AA seq
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MHAFFQAFSALSHSRRQFLATVGGAALAISVGLGGSTALAADREHTIIVGLGGQINTLDP
LRADYNQTNTIISAVYDTLVTYDDTKLVGSLATEYAYSDDAKSITFTLRPDVKFHDGTAL
TAKDVAYTLDRLKRLGAGVASLIDGYDSTTVTDDTHLTINLTKPNTLFLPSLSKIYILNS
ALVTANAAADDGQGWLQAHDAGSGPYVLGDQSQAVVIDLFAGYWAAEAGRPESIVFRRID
ESSTRRDELRAGNIDVAFGFADRDAAAMATDPALKVVPINTSYQTEVVFNTKVGPTADPK
VRKALRMVYDYAGGLRGVRGGNGKVANGPLPARLDCRPELPEVKRDLEAAKAMLAEAGAA
NLKLKMNFQPVFELQKQEATLFQSNLREIGIDLELEPIAYPNYLASLKDPNSIPQMMLLE
DFAQFPDAGIMLVKGYKSDAIGTNRTGYANPEVDKLLDTALATADDAKRCDLYKQVQTIL
DNDSVMVDMYGVYKPAAYRVGTLADLKASMLATPAEPADFRLAKP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcgtttttccaggccttttcggcgctgtcgcacagccggcggcagtttctggcg
accgttggcggcgccgcactcgcgatttcggtcggccttggcggttctacggcgttggcc
gcggatcgcgagcacacgatcatcgttggcctcggcggtcagatcaacacgctcgacccg
ctgcgcgccgactacaaccagaccaacaccatcatcagtgctgtctatgatacgctggtg
acgtacgacgacaccaagctggtcggcagcctggccaccgaatacgcctattcggatgac
gccaagtcgatcaccttcacgctgcgtcccgacgtgaagtttcacgacggcaccgcgctg
accgccaaggatgtcgcttacacgcttgatcgcctgaagcgcctcggcgccggcgtcgcc
tcgctgatcgacggctacgattcgaccacggtcaccgacgacacgcatctcactatcaat
ctcaccaagcccaacacgctgttcctgccgtcgctgagcaagatctacatcctcaattcc
gcgctggtcaccgccaatgcggccgccgacgacggccagggctggctccaggcacatgac
gccggctccggtccttacgtgctgggcgaccagtcgcaggccgtggtcatcgacctgttt
gcgggatattgggccgccgaggccggccgtcccgaatcgatcgtcttccgccgcatcgac
gaaagctcgacgcgccgcgacgaactgcgcgccggcaacatcgacgtcgccttcggcttc
gccgaccgcgatgcggccgccatggccaccgacccggcgctgaaggtggtgccgatcaac
accagctaccagaccgaagtcgtcttcaacaccaaggtcggcccgaccgccgatcccaag
gtgcgcaaggcgctgcgcatggtctacgactatgcaggcggcctgcgtggcgtccgcggt
ggcaacggcaaggtggccaatggcccgctgcctgcgcgcctcgactgccgtccggaactg
cccgaggtgaaacgcgacctcgaagctgccaaggcgatgcttgccgaggcgggcgctgcc
aacctgaagctcaagatgaacttccagccggtgttcgagctgcagaagcaggaagcgacg
ctgttccagtccaacctgcgcgagatcggcatcgacctcgaactcgagccgatcgcctat
ccgaactacctcgccagcctgaaggacccgaactcgatcccgcagatgatgctgctcgag
gacttcgcccagttcccggatgccggcatcatgctggtcaagggctacaagtcggatgcc
atcggcaccaaccgcaccggctacgccaatccggaagtcgacaagctactcgacacggca
ctcgccacggccgacgacgccaagcgttgcgacctctacaagcaggtccagaccatcctc
gacaatgactccgtgatggtcgacatgtatggtgtctacaagccggccgcctatcgcgtc
ggcacgcttgccgatctcaaggccagcatgctcgccacgcccgccgagccggcggacttc
cggctcgccaagccgtaa
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