Aminobacter sp. MSH1: CO731_00892
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Entry
CO731_00892 CDS
T05420
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
amih
Aminobacter sp. MSH1
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amih03400
]
CO731_00892
Enzymes [BR:
amih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO731_00892
DNA repair and recombination proteins [BR:
amih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CO731_00892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AWC21441
UniProt:
A0A2S0XEH8
LinkDB
All DBs
Position
complement(916439..919564)
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AA seq
1041 aa
AA seq
DB search
MSGRASPRVLSIPPGAPFLPTLAASLLDGTLIPDFRFDGDPLALADVTIYVPTRRAARAL
RGVFVDAAGGRSAILPVIKPLGEFDEDEAAFEAEGGAALDLAPPISSIDRLLTLAPLVRA
WKRRLPAHVAALFEEEVVVPASAADAIWLARDLSGLMDEIETEGSDWAKLAGLVSGELSG
WWQVTLDFLSIVTSVWPDLLAERDQSNPAAHRSALIRLEAERLRRNPPAGPVIAAGSTGS
IPATAELLAAIARLPRGAVVLPGLDASLDEVAYDAITAPDLRASVLGHPQYGLAKLIGKI
GILRRDVEELGVPSPALVRRAAIVGEALRPAETTDAWAEKRGSVSDAEIADALAGVTLLE
AAHERDEAAAIAIALREAVAQEGHRAALVTSDRNLARRVAAELRRFGIQADDSGGVPLAN
TPPAALLRTMVEAAIRPGDPVAVLSLLKHPLLRLGLERHVVRRAAETIELVVLRGGVGRP
DVARLAEDFDARLTGIGDASRKPFWFDRINARRIEEARDVAVRLVAAVAPLAALRGDEAI
ELGMVVRATVEAFENLGRDELGGLATLYDGDAGAKLAESLRGLVSAQASFSFAVAEWPDA
LDALVAPDAVKPSQGADRAISIWGALEARLQTVDTLVIGALNEGSWPRKAEADRFMSRVM
KTGIDLEPPERRIGLAAHDFQMAMGARNVVLSRSARSGDAPAVPSRWLQRLLTYVGPDHA
AVLRKRGATLLGWARQLDAGEKADFAARPDPKPPVAVRPRRFSVTEIETLRRDPYAVYAR
RILRLIPVDPLVRDPGAAERGTLFHDILHLFSATVGDPRAPQALDVLIAAGRHCFAEAAL
PADVEAVWWPRFERMAEGILEWERSRAAAVASRHAEESAGATEVGRTGVTLSGRADRIDL
LAGGMADIIDYKTGSSPSKAQAHTLIAPQLALEGALLRRGAFHELGKREPSQLAFVRLKP
NGEVFEESILEHNRKPKSAAELSEEAWTRLEQLLQHYDDPATGYLSRALPFREGETDGDY
DHLARVLEWSAGGDGGSEGEE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccgcgcgtcgccacgcgtcctttccatcccgcccggcgctcccttcctgccg
acgctggcggcatccctgctcgacggcaccctgatccccgacttccgcttcgacggcgac
ccgctggcactggccgacgtcaccatctacgtgccgacgcgccgtgccgcgcgggcgttg
cgtggggtcttcgtcgacgccgccggcggccgctcggccatcctgcctgtcatcaagccg
ctcggcgagttcgacgaggacgaggctgccttcgaggccgagggcggagccgcgctcgac
ctggcaccgccgatttcgtccatcgaccgcctgctgacgctcgcgccgctggtgcgcgcc
tggaagcgccgcctgcccgcccatgtcgccgccctgttcgaggaggaggtcgtggtgccg
gcttccgctgccgacgctatctggctggcgcgcgatctctctggcctgatggacgagatc
gagaccgaaggttccgactgggccaagctcgccggccttgtctcgggcgaactctccggc
tggtggcaggtcacgctcgatttcctgtccatcgtcacttcggtctggcccgacctgctc
gccgagcgcgaccagtccaaccccgccgcccaccgcagcgccctgatccggctcgaggcc
gagcgcctcaggcgcaatccgccggcaggtccggtcatcgccgccggttcgacaggctcg
atcccggccaccgccgagcttttggcagcaattgcgcgcctgccgcgcggtgccgtcgtg
cttccggggctcgatgcctcgctcgacgaggtcgcctacgatgcgatcaccgcgcccgac
ctccgcgcttcggtgctcggccacccgcaatacggcctcgccaagctgatcggtaagatc
ggcatcctgcgccgcgacgtcgaagaactgggtgtcccgtcgccggcgctggtgcgccgc
gctgcaatcgtcggcgaagcgctgcgcccggccgaaaccaccgacgcctgggccgaaaag
cgcggcagcgtcagcgatgccgaaatcgccgacgcactcgccggggtcactctgctcgaa
gcagcccacgagcgcgacgaggctgcggcgattgccatcgcgttgcgcgaggcggtcgca
caggaaggccatcgcgccgccctcgtcacttccgaccgcaacctcgcccgccgcgttgcc
gccgaactgcgtcgcttcggcattcaggccgatgattccggcggagtgccgctggccaac
accccgccggccgccctgttgcgcaccatggtcgaggcggccatccgccccggcgatcct
gtcgccgtgctgtcgctgctcaagcacccgctgctgcggctcgggctggagcgccacgtc
gtcaggcgggccgccgagaccatcgagctggtggtgctgcgtggcggcgtcggccgaccc
gatgtcgcccggctcgccgaagatttcgacgcgcgcctcaccggcatcggcgatgcgtcg
cgcaagcctttctggttcgaccgcatcaacgcccggcgcatcgaggaggcgcgcgacgtt
gcggtcaggctggtcgccgcagttgcgccgctcgccgcccttcgtggcgacgaggccatc
gagctcggcatggtcgtgcgcgccaccgtcgaggcgttcgaaaatctcggccgagacgag
cttggcggactggcaaccctctatgacggcgatgccggcgccaagctggcggaatcgctg
cgcgggctggtctcggcccaggcgagcttcagcttcgccgtagccgaatggccagacgcg
ctcgacgcgctcgtcgcccccgacgcggtcaagccgtcgcaaggtgccgaccgggccatc
tcgatctggggtgcgctcgaggcgcgcctgcagacggtcgacacgctggtcatcggcgcg
ctcaacgagggcagctggccgcgcaaggccgaggccgatcgcttcatgtcacgcgtcatg
aagacgggcatcgacctcgaaccgccggagcgtcgcatcggcctcgccgctcacgatttc
cagatggcgatgggcgccaggaatgtcgtgctgtcgcgctcggcccgctcgggcgatgca
cccgccgtgccgtcgcgctggctgcagcgcctgctgacctatgtcggccccgaccacgcc
gccgtgctgcgcaagcgtggtgctacgctgctcggctgggcgcgccagctcgacgccggc
gagaaggccgacttcgccgcccgcccggaccccaagccgcccgtcgcggtgcggccgcgc
cgcttctcggtcaccgagatcgagacgctgcgccgtgatccctatgccgtctatgcgcgg
cgcatcctgaggctgattccggtcgacccgctggttcgcgatcccggtgccgccgagcgc
ggcacgctgttccatgacatcttgcacctgttttcggcgacggtgggtgatccgcgcgca
ccgcaggcgctcgacgtgctcatcgccgccggtcgccactgctttgccgaggctgccttg
cccgccgatgtcgaggccgtctggtggccgcgcttcgagcgcatggccgaaggcatcctc
gaatgggagcgcagccgcgcggccgccgtcgccagccgccatgccgaagaaagcgccggc
gccaccgaggtcggccggaccggcgtcacgctgtccggccgcgccgaccgcatcgacctg
ctcgccggcggcatggccgacatcatcgactacaagactggctcttcgccttccaaggcg
caggcgcacacgctgatcgcgccgcagttggcgctcgaaggcgccctgcttcggcgtggc
gccttccacgaactcggcaagcgcgaaccgtcgcagctcgccttcgtccgtctgaagccc
aatggcgaggtgttcgaggaatcgatcctcgaacacaaccgcaagcccaagtcggcggcg
gagctttcggaagaggcctggacgcggctggagcaactgctccagcactacgacgatccc
gccaccggctatctctcccgcgcactgcccttccgcgagggcgaaaccgacggcgactac
gaccatctcgcccgtgtcctcgaatggtcggctggcggcgacggcggctcggagggcgaa
gaatga
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