Aminobacter sp. MSH1: CO731_00925
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Entry
CO731_00925 CDS
T05420
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amih
Aminobacter sp. MSH1
Pathway
amih03030
DNA replication
amih03430
Mismatch repair
amih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CO731_00925 (dnaQ)
03430 Mismatch repair
CO731_00925 (dnaQ)
03440 Homologous recombination
CO731_00925 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amih03032
]
CO731_00925 (dnaQ)
03400 DNA repair and recombination proteins [BR:
amih03400
]
CO731_00925 (dnaQ)
Enzymes [BR:
amih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CO731_00925 (dnaQ)
DNA replication proteins [BR:
amih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CO731_00925 (dnaQ)
DNA repair and recombination proteins [BR:
amih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CO731_00925 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AWC21474
UniProt:
A0A2S0XEN5
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All DBs
Position
complement(947898..948614)
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AA seq
238 aa
AA seq
DB search
MREIIFDTETTGLDNREDRVIEIGGIEMVNRFPTGRTFHKYINPQGRQVHPEAQAVHGIS
NADLEGKPTFAEIIDDFIDFIDGAKLVAHNGTFDLGFINAEFARLDQAAIEAERLIDTLA
LARRKHPMGPNSLDALCRRYGIDNSRRTKHGALLDSELLAEVYIELIGGKQSALVLDSFS
SSGGNGGSTRQIEIVIAARPEPLPTRLSEAELAAHEKLVGTLGEKAIWAKLLSPAEPN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagatcattttcgatacggaaacgaccggcctcgacaaccgcgaggaccgcgtg
atcgagatcggcggcatcgagatggtcaaccgctttccgaccggccgcacgttccacaaa
tacatcaacccgcaggggcggcaggtccatccggaagcccaggcggtgcacggcatctcc
aatgccgatctcgagggcaagccgaccttcgctgagatcatcgacgacttcatcgacttc
atcgacggcgccaagcttgtcgcgcacaacggcactttcgatctgggtttcatcaatgcc
gagtttgccaggctcgaccaggcggcgatcgaggccgagcgtctgatcgatacgctggcg
cttgcccgccgcaagcacccgatgggcccgaattcgctcgatgcgctgtgccggcgctac
ggcatcgacaacagccgccgtaccaagcacggcgccctgctcgactccgagctcctggcc
gaagtctatatcgagctgattggtggcaagcagtcggcgctggtgctggacagcttttcg
tcatccggcggcaatggcgggtcgacgcggcagatcgagatcgtcatcgccgcccggccc
gagccgctgccgacccggctgagcgaggccgagcttgccgcgcacgagaagctggtaggc
acccttggcgaaaaggcgatctgggcgaagctgctctctcctgccgaacccaactga
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