Aminobacter sp. MSH1: CO731_00939
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Entry
CO731_00939 CDS
T05420
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
amih
Aminobacter sp. MSH1
Pathway
amih03030
DNA replication
amih03430
Mismatch repair
amih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CO731_00939
03430 Mismatch repair
CO731_00939
03440 Homologous recombination
CO731_00939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amih03032
]
CO731_00939
03400 DNA repair and recombination proteins [BR:
amih03400
]
CO731_00939
Enzymes [BR:
amih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CO731_00939
DNA replication proteins [BR:
amih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CO731_00939
DNA repair and recombination proteins [BR:
amih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CO731_00939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AWC21488
LinkDB
All DBs
Position
complement(962867..963916)
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AA seq
349 aa
AA seq
DB search
MAQKKAHEVDSWLARPAAEAVIVLIYGPDRGLVSERAAAFAAKTGLPLDDPFSVVKLDAA
DVERDSGRLVDEARTVPMFAPRRLIWVRNAAAQKSLADDVKALVADPPRDAIVLIEAQDL
KKGAPLRTVVEGAFAGMALPCYGDEARDIETLIDEELRAAGLTMAMDARNALRRSLGGDR
LATRGEVQKLTLYAMGRGEISLDDVKAMTGDVSALSLDDAIDAALGGNIAEFDAAFTKQC
QTGSQAAQLLATATRHLQNIHLMRGEMESGSRNAAAVIAAARPPVFFARRRAVERALAGW
TAAALSRALVRLQSTTLQTRRRPDLAIALARQAMLGIAVEGARLAGGRR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaagaaagctcacgaggtcgattcctggctcgcacgccccgcagccgaagcg
gtgatcgtgctgatctacggtcctgatcgcggtctcgtgtccgaacgtgctgcagccttt
gccgccaagaccggccttcctctcgacgatccgttctcggtggtgaagctcgacgccgcc
gacgtcgaacgcgacagcggccgcctcgtcgacgaagcgcggaccgttccgatgtttgcg
ccgcgacgcctgatctgggtgcgcaacgcagccgcccagaagagcttggccgacgacgtc
aaggccctcgtcgccgatccgccgcgcgatgcgatcgtattgatcgaggcccaggacctc
aagaaaggcgcaccgctgcgcaccgtggtcgagggcgcttttgccggcatggccctgccc
tgctacggcgacgaggcgcgcgatatcgagacccttatcgacgaagagttgcgtgccgcc
ggcctgacgatggcgatggatgcccgcaatgcgctgcgccgcagcctcggtggcgaccgc
ctggcgacgcgcggcgaagttcagaagctcacgctctacgccatgggccgcggcgaaatc
agcctcgacgacgtcaaggcgatgaccggcgatgtctccgcgctttctctcgacgatgcc
atcgacgccgcccttggcggcaacatcgccgagttcgacgcggccttcaccaaacagtgc
cagaccggcagccaggcagcccagttgctggcaactgcgacccgccacctgcaaaacatc
catttgatgcgcggcgaaatggaatcgggcagccgcaacgccgcagccgtgatagcagcc
gcgcggccgccggtgttcttcgcccgtcgccgtgcagtcgagcgcgcgctggcaggctgg
actgcggcggcgctgagccgcgcgcttgtgcggctgcagtcaacaaccttgcagacgcga
cgtcgaccggacctcgccattgccctggccaggcaagcgatgctgggcatcgccgtcgaa
ggtgcacgcttggccggcggacggcgttga
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