Aminobacter sp. MSH1: CO731_00959
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Entry
CO731_00959 CDS
T05420
Symbol
ypfD
Name
(GenBank) 30S ribosomal protein S1-like protein
KO
K06959
protein Tex
Organism
amih
Aminobacter sp. MSH1
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CO731_00959 (ypfD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
T2SSK
YqgF
S1_RRP5
HHH
HHH_6
OB_RRP5_4th
DUF460
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AWC21508
UniProt:
A0A2S0XEM7
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Position
985101..987479
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AA seq
792 aa
AA seq
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MIGRLAFAPAVTMFAHPFNRHQDSMAGDIRKIAAIIAAEINAKAEQVIAAVGLLDEGATV
PFVARYRKEVTGGLDDTQLRDLSERLAYLRELEARRAAIVESITGQGKMTDELAIRIASV
ATKAELEDIYLPYKPKRRTKAEIARERGLGPLAEAILADRSKVPAELAVPYVVGDVADVK
AALEGARDIVAEGISENAELLGRLRTHMKERAVMRARVVDGKQEAGAKFSDYFDHSERWA
SVPSHRALAMLRGRNEDVLSLDLEIDADDTSPVKPVERMIAAAYAIGATLPGDQWLMTVA
GWTWRVKLSLSLSLDLMRDLREAAEEEAIRVFSRNLKDLLLAAPAGSRATMGLDPGIRTG
VKVAVIDATGKVLDTTTVYPFPPRNDVRGTQAELARLIIRHKVELIAIGNGTGSRETERL
VADLLTDMPAPKPTKVIVSEAGASVYSASATAAAEFPNLDVSLRGAVSIARRLQDPLAEL
VKIEPKSIGVGQYQHDVDQYRLGRSLEAVVEDAVNAVGVDLNTASAPLLARVSGLGPSLA
ESIVAHRDASGAFATRRDLLAVPRLGQRAFEQCAGFLRIRDGKEPLDSSSVHPEAYGVAK
KIVASCGRDLRQLMGDSAALKAIDPRAFVDERFGLPTVRDIIAELEKPGRDPRPGFKTAT
FADGVDDIKDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADKFVKDPHEVVKA
GDVVKVRVVEVDIPRKRIGLTMRKDGGEPAPRSAAPAKGRDMKFASLPKPQQNKPEQQGA
FGAALLEAMKRK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgattggccgtttggcgttcgccccggcagtcactatgttcgcgcacccgttcaacagg
caccaggattccatggctggcgacatcaggaaaatcgctgcgatcatcgcagccgagatc
aatgcgaaggccgagcaggtcattgcggcagtcggactgctggatgagggtgcgactgtt
cccttcgtcgcgcgctaccgcaaggaagtcaccggcggcctcgacgatacccagctgcgc
gatctgtccgaacggctcgcctatctgcgcgagctggaagcgcggcgcgcggcaatcgtc
gaatccatcaccggccagggcaagatgaccgacgagctggcgatccgtatcgccagcgtc
gccaccaaggccgagctcgaagacatctacctgccttacaagcccaagcgccgcaccaag
gctgaaatcgcgcgggagcgcgggctcgggccgctcgccgaagcgatcctcgccgaccgc
tccaaggtaccggccgagttggccgtgccttacgtcgtcggcgacgtagccgacgtgaag
gcagccctcgaaggcgcgcgcgacatcgtcgccgaaggcatttcggagaacgccgagcta
ttgggccgcctgcgtactcacatgaaggagcgcgcggtcatgcgcgcccgcgtggtcgac
ggcaagcaggaggcgggcgccaagttctcggactatttcgaccattccgaacgctgggcc
tcggtgccgagccaccgcgcgctcgccatgctgcgcggccgcaacgaggacgtgctgtcg
ctcgacctcgagatcgacgccgacgacacctcgccggtcaagccggtcgagcgtatgatc
gccgctgcctatgcgattggcgcgacgctgcccggcgaccagtggctgatgaccgtcgcc
ggctggacctggcgcgtgaagctgtctctgtcgctgtcgctcgacctgatgcgcgatctg
cgcgaggccgccgaggaagaggcgatccgcgtcttctcgcgcaacctcaaggaccttctg
ctcgccgcccctgccggctcgcgcgccactatgggtctcgatccgggcatccgcaccggc
gtcaaggtggcggtcatcgatgccaccggcaaggtgctcgacaccaccaccgtctacccc
ttcccgcccaggaacgacgtgcgcggcactcaggccgagcttgcccggctgatcatccgc
cacaaggtcgagctgatcgccatcggcaacggcaccggcagccgcgaaaccgagcgtctc
gttgccgacttgctgacggacatgccggcgcccaagccgaccaaggtcatcgtcagcgag
gccggggcctctgtctattcggcgtccgccacggctgcggccgaattccccaatctcgac
gtgtcgctgcgtggtgcagtgtccatcgcgcggcgcctgcaggacccgctcgccgagctg
gtcaagatcgaacccaagtcgatcggcgtcggccagtaccagcacgacgtcgaccagtat
cggctcggccgttcgctcgaagcggtggtcgaagacgcggtgaacgccgtcggcgtcgac
ctcaacacggcctccgccccccttctcgcccgcgtctccggtctcgggccgtcgctcgcc
gagtcgatcgtggcgcatcgcgacgcctcgggcgcctttgccacgcgccgcgacctgctc
gccgtgccacggctcggccagcgtgccttcgagcaatgcgctggcttcctgcgtatccgc
gacggcaaggaaccgctcgactcatcgtcggtccaccccgaagcctatggcgtggccaag
aagatcgtggcgtcctgcggccgtgacctgcgccagttgatgggcgacagcgccgcgctg
aaggcgatcgatccgcgcgccttcgtcgatgagcgtttcggcctgccgacggtgcgcgac
atcatcgccgagctggaaaagccgggccgcgatccgcgtccgggcttcaagaccgcgacc
ttcgccgacggtgtcgacgacatcaaggacctgaagccgggcatgttgctcgagggaacc
gtcaccaacgtcgccgccttcggcgccttcgtcgacatcggcgtgcaccaggacgggctt
gtccatgtgtcgcagctcgccgacaagttcgtgaaggacccacacgaggtggtgaaggcg
ggcgacgtggtgaaggtccgcgtcgtcgaggtcgacatcccgcgcaagcgcatcgggctg
accatgcgcaaggacggcggcgagcccgcaccccgctcggcagcccccgccaagggccgc
gacatgaagttcgcctcgttgcccaagccgcagcagaacaagcctgagcagcaaggtgcg
ttcggcgcggcgctgctcgaggcgatgaagcgtaagtaa
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