Aminobacter sp. MSH1: CO731_00967
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Entry
CO731_00967 CDS
T05420
Symbol
ffh
Name
(GenBank) p48
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
amih
Aminobacter sp. MSH1
Pathway
amih02024
Quorum sensing
amih03060
Protein export
amih03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
amih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CO731_00967 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CO731_00967 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CO731_00967 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amih02044
]
CO731_00967 (ffh)
Enzymes [BR:
amih01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CO731_00967 (ffh)
Secretion system [BR:
amih02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CO731_00967 (ffh)
Eukaryotic Sec-SRP protein
CO731_00967 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_30
AAA_22
AAA_31
AAA_19
DnaB_C
ATPase
ResIII
ArsA_ATPase
6PF2K
AAA_25
AAA_17
ABC_tran
APS_kinase
MipZ
AAA_14
TctA
Thymidylate_kin
AAA_16
AAA
AAA_18
KTI12
AAA_5
NPHP3_N
AAA_28
NACHT
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
AWC21516
LinkDB
All DBs
Position
995544..997124
Genome browser
AA seq
526 aa
AA seq
DB search
MFESLQERLGSILNGLTGRGALSEADVSAALREVRRALLEADVALEVVRSFTDRVREKAV
GAAVLKSIKPGQMVVKIVHDELIEMLGSEGVAIDLNAPAPVVIMMVGLQGSGKTTTSAKI
AKRLTERQGKKVLMASLDTRRPAAQEQLRQLGEQTKVATLPVITGQSPVDIAKRAVQAAK
LGGHDVVILDTAGRTHIDEPLMAEMADIRKVSDPHEILLVADSLTGQDAVNLAKNFDDRV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMEALEEFYPKRIADRILGMGDI
VSLVEKAAENIDAEKAAAMAKKMQSGKFDLNDLADQLGQMQKMGGMGGIMGMMPGMGKMK
DQMASAGLDDKMFGRQIAIISSMTKAERANPDVLKHSRKKRIAAGSGTDAAEINKLLKMH
RQMADMMKAMGGKGKGGGLMRGMMGGLASKMGLGGMMPGMGGMPDLSKMDPKQLEALQKQ
AEAAGLGKGLKGLPGGGLPGGGLPGLPGGMKLPGLGGGLPGLGKKK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatcgctgcaagagcgacttggatcgatcctcaacggcctgaccggccgtggc
gcgctgtcggaagccgatgtctcggctgccctgcgcgaggttcgtcgtgccttgctcgaa
gcggacgtcgcactcgaagtggtccgctccttcaccgatcgcgtccgcgagaaggcggtc
ggcgcggcggtcctgaaatcgatcaagcccggacagatggtcgtcaagatcgtccatgac
gagctgatcgagatgctcggctccgaaggcgtcgccatcgacctcaatgcgccggcgccg
gttgtcatcatgatggtcggcctgcagggctcgggcaagacgacgacctcggccaagatc
gccaagcggctgaccgagcgccagggcaagaaggtcctgatggcctcgctcgacacgcgc
cgtccggcagcgcaggagcagctgcgccagctcggcgagcagacaaaggttgccaccctt
cccgtcattaccggccagtcaccggtcgacatcgccaagcgcgccgtccaggcggccaag
ctcggcggccatgacgtcgtcatcctcgataccgccggccgtacccatatcgacgagccg
ctgatggccgagatggccgacatccgcaaggtgtcggacccgcacgagatcctgctcgtc
gccgactcgctgaccggccaggacgccgtcaacctcgccaagaatttcgacgaccgcgtc
ggcatcactggcctggtgctgacccgcatggacggcgacggccgtggcggtgccgcgctt
tcgatgcgtgccgtcaccggcaagccgatcaagctgatcggcgtcggcgagaagatggaa
gcgctggaggagttctatcccaagcgcatcgccgaccgcatcctcggcatgggcgacatc
gtttcgctggtcgagaaggcagccgaaaacatcgacgcggaaaaggccgcggcgatggcc
aagaagatgcagtcgggcaagttcgacctgaacgacctcgccgaccagcttggccagatg
cagaagatgggcggcatgggcggcatcatgggcatgatgccaggcatgggcaagatgaag
gaccagatggcttcggccggcctggacgacaagatgttcggccgccagatcgccatcatc
tcgtcgatgaccaaggccgagcgcgccaaccccgacgtcctcaagcactcgcgcaagaag
cgcatcgccgccggttccgggaccgatgcggccgaaatcaacaagctgctcaagatgcat
cgccagatggccgacatgatgaaggccatgggcggcaagggcaaaggcggcggtctcatg
cgcggcatgatgggcggccttgcttcaaagatgggcctcggtggcatgatgccgggcatg
ggcggcatgcccgacctgtcgaagatggatcccaagcagctcgaagcgctgcagaagcag
gcggaagccgccggcctcggcaagggcctcaagggcctgcccggcggcggacttccaggt
ggcggtttgccgggcctgcctggcggcatgaagcttccgggcctcggcggcggcctgccc
ggcctcggcaagaagaagtga
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